Neogale vison (American mink): 122915087
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Entry
122915087 CDS
T08764
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122915087 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122915087 (POLR1B)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122915087 (POLR1B)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122915087 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
122915087
NCBI-ProteinID:
XP_044117545
LinkDB
All DBs
Position
8:complement(107168011..107197973)
Genome browser
AA seq
1141 aa
AA seq
DB search
MDPGGRMEPAGRWQNLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGL
SHAVQAIPPFEFAFKDERISLTIVDAVISPPMVPKGNICKELNIYPAECRGRRSTYRGKL
TADISWAVNGISRGIIKQFLGYVPIMVKSKLCNLHDLPPKALIEHHEEAEEMGGYFIING
IEKVIRMLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTV
MLNFIYRKELFFLPLGFALKALVSFSDYQIFQELMKGKEEDSFFRNSVSQMLRIVMEEGC
STQKQVLNYLGERFRVKLSLPDWCPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLF
ALAKGECMEDSPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRAQKTNVSINTE
NLMKIFNLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFVRYLSHFRCVHR
GADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFAYTASVPALL
CSLGVTPVDGTPHRPYSECYPVLLDGVMLGWVDKELAPSIADSLRHYKVLREKRIPPWLE
VALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNIAIFEDEVLAG
VTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQARSDNKLYRL
QTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVY
KSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYGYLNLNTG
ESFVMYYKSKENCIVDNIKVCSNDTGNGKFKCICITMRVPRNPTIGDKFASRHGQKGILS
RLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSE
ENSALEYFGELLKAGGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRT
TGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCIKCG
SLLSPLLEKPPPSWSATRNRKYNCTLCDRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV
I
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcggacgcatggaaccagccggccggtggcagaatctgcccagcgggcct
agcctaaagcacttaactgacccgtcttatgggatcccgcgggagcagcaaaagccagcg
ttgcaggaactgacgcgggcgcatgtggagtccttcaactacgctgtgcgcgaggggctc
agccacgcggtgcaggctatccctccctttgaattcgctttcaaagatgagcgcatctcc
cttaccattgtggacgctgtcatcagcccgcccatggttccgaaagggaacatctgcaaa
gagctcaacatttatccagccgaatgccggggccggaggagcacctaccggggcaagctg
acggctgatatcagctgggcagtgaatggaatctcaagaggaatcattaaacagtttctt
ggctacgttcccatcatggtgaagtctaagctttgcaacttacacgaccttcctcccaaa
gccctcattgagcaccatgaggaagcagaggaaatgggaggctattttataataaatggc
attgaaaaagtcatccgaatgttgattatgcctcggaggaatttccccattgcaatgatc
agaccaaaatggaaaaccagagggcctggctatactcagtatggagtctcaatgcactgt
gtgagggaggaacattctgcagtcaatatgaaccttcactacttggaaaatggcacggtt
atgttgaactttatttatcggaaagaactattttttcttcctttgggatttgcacttaag
gcgcttgtcagcttttccgattatcagatttttcaggagctcatgaaaggcaaagaggag
gactctttctttaggaactccgtttctcagatgttaaggatcgtcatggaagagggttgt
tccacacaaaagcaggttcttaactatctaggtgaacgcttcagagtcaagctcagtctt
cctgactggtgtccaaatgaacaagctgcagagtttctgtttaaccagtgcatctgtatc
cacctgaaatccaatacggaaaagttttatatgctttgtctcatgacccggaagctcttt
gcattagccaaaggagagtgcatggaggacagtccggatagtttagtgaatcaggaagtc
ctgacgcccggtcagctcttcctcatgtttctgaaggaaaaaatggaatcttggttagta
tctattaaaatagctctagataagagggctcagaagacgaatgtgtccataaacactgaa
aatttgatgaagatttttaatctgggaacagaccttacaaagccgtttgagtatcttctt
gctactggaaatctgcgttctaaaacaggtcttggcttcctgcaagattctggcctttgt
gttgtggctgataagctgaacttcgtacgctatctctcccatttccgctgtgtgcacaga
ggggccgattttgccaagatgaggaccaccacggtacgaaggcttctgccggagtcctgg
ggcttcctgtgtcctgtgcacaccccagacggggagccctgcggcctcatgaaccacttg
actgctgtgtgcgaggtcgttacacagtttgcgtacacggcatctgttcccgctctgctg
tgcagcttgggggtcactccagttgacggaactccacaccgaccgtacagcgagtgctac
cctgtcctgctggatggcgtcatgctcggctgggtggataaggaactcgctcctagcatt
gcagattccctccgacattataaggtgttgagagaaaaaagaattcctccctggttggaa
gtggcccttatccccatgacaggaaaaccgagtctgtacccaggattgttcctgtttacc
actccttgtagactggtgcgtccggtgcagaacttggaattaggcaaagaagaactaatt
ggaactatggagcagatcttcatgaacattgccatctttgaggatgaggttttggcgggt
gttaccactcaccaggagctcttcccccacagcctcctgagtgtgatcgccaacttcatc
cctttctccgatcacaaccagagtccccggaacatgtaccagtgccagatggggaagcaa
accatgggctttccacttctcacttaccaagctcgatcagataataaactgtatcgtctt
cagactccacaaagccctttagtgagaccatacatgtatgattattatgacatggataac
tatccaattgggacaaatgccatcgttgctgttatttcttatactggctacgatatggaa
gatgccatgattgtgaataaggcctcctgggaacgaggctttgcccatggaagtgtctac
aagtctgagttcatagatctgtctgagaaaattaaacaaggagatgatagtctggtgttt
ggagtcaaacctggtgacccgcggattctgcaaaagttagacgacgatggcttgccgttc
atcggagcccagctacagtatggagacccatattatggctacctgaacctcaacaccgga
gaaagctttgtgatgtactataagagtaaagaaaattgcatcgtggataacatcaaagtg
tgtagtaatgacaccggcaatgggaagttcaagtgtatctgcatcacgatgagagtccct
cggaacccgaccattggagacaaattcgccagtcgccacgggcagaagggcatcctgagc
aggctgtggccagtagaggacatgccgttcaccgagagtgggatggttccagacattctg
ttcaatcctcacggttttccatcccgcatgaccatcgggatgttaattgaaagtatggca
gggaagtccgctgccctgcacggtctctgccatgatgcgacaccctttaccttttcagag
gagaactcggccttggagtacttcggggagctgttaaaagccggtggctacaacttctat
ggcaccgagaggttgtacagcggcatcagtggactagaactggaagcagacattttcata
ggtgtggtttattaccagcgtttgcgccacatggtctcagacaagttccaggttaggacc
acgggagccagagacaaagtcaccaatcagcctattgggggaaggaatgtccagggtgga
atccgttttggggaaatggagcgggatgctcttttagctcatggtacatcttttctcctg
catgaccgcctcttcaactgttcggatcgctcggtagcacacgtgtgcattaagtgtggc
agtttactgtctccgctgctggagaagccacccccttcctggtctgccacgcgcaacaga
aaatacaactgtacgttatgtgatcgaagtgacaccatcgacactgtttctgtgccttac
gttttccggtattttgtagctgaactggcagccatgaacattaaggtgaaattggatgtc
atttaa
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integrated database retrieval system
