Neogale vison (American mink): 122918630
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Entry
122918630 CDS
T08764
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs05014
Amyotrophic lateral sclerosis
nvs05200
Pathways in cancer
nvs05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122918630 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122918630 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
122918630 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122918630 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122918630 (TPR)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122918630 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
DUF5082
DUF1192
Motif
Other DBs
NCBI-GeneID:
122918630
NCBI-ProteinID:
XP_044123233
LinkDB
All DBs
Position
10:complement(52716647..52782074)
Genome browser
AA seq
2362 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLDLEKLNNQLKALTEKNKELEVAQDRNIAIQSQFTRTKEEL
EAEKRDLVRTNERLSQELEYLTEDFKRLNEKLKESNTTKGDLQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRMEEQM
NGLKTSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLDKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSCKIAELQLKLENALTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKRSSTSQTASTPASVSVI
ESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQITDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKE
IATLKQHLSNMEVQLASQSSQRTGKGQPTSKEDVDDLLSQLRQAEEQVNDLKERLKTSTS
NVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRKAIESMEQQLSELKKTLNSVQSEVQEALQRAGTALNNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKD
EVAKCMSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKA
EIARSNASLTNNQNLIQSLKEDLNKVRSEKETIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKDTLNQAETKAKSLESQVENL
QKTLSEKEAEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAA
KSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREH
QERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSK
VTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPV
FGSTSGSVRSTSPNVQPSMPQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEV
VQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQVSDDTVEMPLPKKLK
SVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDL
GPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEDDDDDDEDDTG
MGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEG
NTGTAESSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQR
IQMTRRQSVGRGLQLTPGIGGMQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTSDTSEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVEAESEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQF
NRQRGVSHAMGGRGGINRGNIN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcaagtcctggagcgcacagagctgaacaagctgcctaagtcc
gtccagaacaaactggagaagttcctcgctgaccagcaatccgagatcgatggcctgaag
gggcggcacgagaaatttaaggtggagagtgaacaacagtactttgagatagagaagagg
ctgtcccacagtcaggagagacttgtgaatgaaacccgagagtgtcaaagcttgaggctt
gacctagagaagctcaacaatcaactgaaggcactaactgagaaaaataaagaacttgaa
gttgctcaggatcgcaatattgccattcagagccagtttacaaggacaaaagaagaatta
gaagctgagaaaagagacttagttagaaccaatgagagactatctcaagaacttgaatat
ttaacagaggattttaaacgtctaaatgaaaaacttaaggaaagcaataccacaaagggt
gatctgcagttaaaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaa
aaacgcttggagcaagaaaaggagttgttacataatcagaatacatggctgaatacagag
ttaaaaactaaaactgatgaacttctggctcttggcagagaaaaaggaaatgagatatta
gagcttaaatgtaatcttgaaaacaaaaaagaggaggtttcaagaatggaagaacagatg
aatggcttgaaaacatcaaatgagaatcttcaaaaacatgtagaagagctcttgaccaaa
ctgaaagaggccaaggaacagcaggccagtatggaagagaaattccacaatgaattaaat
gctcacataaagctctctaatctatacaagagtgctgctgatgactcagaggcaaagagc
aatgaactgacccgagcggtagatgaactacacaaacttttgaaagaagctggagaagcc
aataaagcaatacaagatcatcttttagaagtggaggaatctaaagatcaaatggaaaaa
gaaatgcttgacaaaatagggaaattggagaaggaattagagaatgcaaatgatctgctt
tctgccacaaaacgtaaaggagccatactatctgaagaagagcttgcagccatgtctcct
actgcggcagctgtagctaagatagtgaaaccaggcatgaaattaactgagctatataat
gcttatgtggagactcaggatcagttgcttttggagaaactagagaacaaaagaattaat
aagtatctggatgaaatagtgaaggaagttgaagccaaagcaccaattttgaaacgccaa
cgtgaggagtatgaacgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaa
gctatgaaggagattcagcggttgcaggaggacactgataaagctaacaaacattcatct
gtgcttgaaagagacaatcaaaggatggaaatacaaataaaagatctttcacaacagatt
agagtgcttttgatggaacttgaagaagcaaggggtaatcatgtaattcgtgatgaggaa
gtaagctctgctgatataagtagttcatctgaagtaatatcacagcatctagtatcttat
agaaatattgaagaacttcaacagcaaaatcaacgtctcttagtggcccttagagaactt
ggggaaaccagagaaagagaggaacaagaaacaacttcatgcaaaattgctgagctgcag
ctaaaacttgagaatgccctcactgaattagaacaactccgtgagtcacgacagcatcaa
atgcagcttgttgattccatagttcgtcagcgtgacatgtaccgtattttgttgtcacaa
acaacaggagttgccattcctttgcaagcttcaagcttagatgatatttctcttgcgtca
actccaaaacgttcaagtacatcccagactgcttccactcctgcttcagtatctgtaatt
gagtcagcagaggccatagaagccaaggctgcccttaaacagttgcaggaaatttttgag
aattacaaaaaagaaaaggcagataatgaaaaaatacaaaatgagcagcttgaaaaactt
caggatcaaattacagatttgcgatcacaaaacaccaaaatttctacacaactagacttt
gcttctaaacgttatgaaatgctacaagataacgttgaaggatatcgtcgagaaatcaca
tccctacatgagagaaatcagaaactcactgcaacaactcaaaagcaggaacagatcatc
aatacaatgacacaggatttgagaggagcaaatgaaaaactagctgttgcggaagtaaga
gcagaaaacttgaaaaaggaaaaggaaatgcttaaattgtcagaagtccgtctttctcag
cagagagagtctttattagctgaacaaagagggcaaaacttgctgctgactaatctgcaa
acaattcagggaatattagagcgatctgaaacagaaaccaaacaaaggcttagtagccag
atagaaaaactggaacatgagatatctcatctaaagaagaagctggaaaatgaggtggag
caaaggcatacacttactagaaatctagatgttcaacttttagatacaaagagacagcta
gataccgagacaaatcttcatcttaacacaaaagaactattaaaaaatgctcaaaaggaa
attgctacattgaaacaacatctcagtaatatggaagtacagcttgcttctcagtcctca
cagagaactggtaaaggtcagcctaccagcaaagaagatgtggatgatcttctgagtcag
ctaaggcaggcggaagagcaggtgaatgatttgaaggagagactcaaaacaagtactagt
aatgtggaacagtatcgtgcaatggttactagtttagaagaatctcttaacaaggaaaaa
caggtgacagaagaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagttt
cagacacagttggaaaagaagttgatggaagtagagaaggaaaagcaggaacttcaggat
gacaagagaaaagccatagagagcatggaacaacagttatcagagttaaagaaaacactc
aatagcgttcagagtgaagtacaagaagctcttcagagagctggcacagctttgaataat
gagcagcaagccagacgtgactgtcaggaacaggctaaaatagctgtggaagctcagaat
aagtatgagagagaattgatgctacatgctgctgatgttgaagctctgcaagctgccaag
gagcaggtttccaaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagca
gaatcacagttattggagtgtaaagcgtcttgggaggaaagagagagaatgttaaaggat
gaagttgccaagtgtatgtctcgctgtgaagatctagagaaacaaaacagattacttcat
gatcagattgaaaaattaagtgacaaggttgttgcctctgtgaaagaaggtgtacaaggt
cccttgaatgtatcgctcagtgaggaaggaaaatctcaagaacaaattttagaaattctg
agatttatacgacgagaaaaagaaattgctgaaaccaggtttgaggtggctcaggttgag
agtctgcgttatcgacaaagagttgaacttttagaaagagagctgcaggaactgcaggat
agtctaaatgctgaaagagagaaagtccaggtgactgcaaaaacaatggcccagcatgag
gaactgatgaagaaaactgaaacaatgaatgtagtgatggagaccaataagatgttaaga
gaagagaaggagaggctggaacaggatttacagcagatgcaagcaaaggtaaggaaactg
gagttagatattttacccttacaagaagcaaatgccgagctgagtgagaaaagcggtatg
ttgcaagcagagaagaagttactagaagaagatgtcaaacgttggaaagcacggaaccag
catctagtaagtcaacagaaagatccagatacagaagaatatcggaagctcctttctgaa
aaggaagttcatactaagcgtattcaacagttgactgaagaaattgggagacttaaagct
gaaatagcaagatcaaatgcatctttgaccaacaaccagaacttaatccagagtctaaag
gaagacttaaataaagtaagaagtgaaaaggaaaccatacaaaaggacttagatgccaaa
ataattgatatccaagaaaaagtcaaaactattactcaggtcaagaagattgggcgtaga
tacaagactcaatatgaagaacttaaagcacaacaggacaaggtcatggagacctcggct
cagtcttctggagaccaccaggaacagcatgtctccgtccaagaaatgcaggagctcaaa
gataccctcaatcaagctgaaacaaaggccaaatcactagagagtcaagtagaaaatctg
cagaagacattatctgaaaaagaggcagaagcaagaaatctgcaggaacagactgtgcag
cttcagtctgagctttcacgactccgtcaggatcttcaagatagaaccacacaagaggag
cagctccgacagcagataactgaaaaggaagaaaaaacaagaaaggccatagtagcagca
aagtcaaagattgcacatttagctggtgtgaaagatcagttaactaaagaaaatgaggag
cttaaacaaaggaatggagccttagatcagcagaaagatgaattggatgttcgaatgact
gctcttaaatcccagtatgaaggtcgaattagtcgcttagaaagagaactccgagagcat
caagagagacaccttgagcagagagatgagcctcaagaacctactaataaggtcccagaa
cagcagagacagatcactttgaaaacaactccagcttctggtgaaagaggaattgccagc
acatcagacccaccaacagccaatatcaagcctactcctgttgtgtctactccaagtaaa
gtgacagctgcagcaatggctgggaataaatcaacacccagggctagtatccgcccaatg
gtcacacctgcaactgttacaaatcctactactaccccaacagctacagtgatgcccact
acgcaagtagaatcacaggaagctatgcagtcagaagggcctgtggaacatgttccagtt
tttggaagcacaagtggttctgtccgttctactagtcctaatgtccagccttctatgcct
cagccaattttaactgttcagcagcaaacacaggctacagcttttgtgcagcccacccag
cagagtcatcctcagattgagcctgcaaatcaagagctgtcccccaacatagtagaggtt
gttcaaagttcaccagttgagcggccttctacttccacagcagtatttggcactgtgtca
gctaccccaagttcttctttgcctaaacggacacgtgaagaagaagaagatagcaccata
gaggcatcagatcaagtctctgatgacacagtggaaatgcctcttccaaagaagttgaaa
agtgttacccctgtaggaactgaggaagaagttatggcggaagaaagtactgatggagag
gtagaaactcaagtatataaccaagattctcaagattccattggagaaggagttacccag
ggagattatactccaatggaagacagtgaagaaacctctcagtctctacaaatagacctt
ggaccccttcagtcagatcagcaaacaacaacttcatcccaagatggtcagggcaaagga
gatgatgtcattgtgattgacagtgatgatgaagaagaggatgatgatgaaaatgatggg
gaacatgaggattacgaggaggatgaagatgatgatgacgatgatgaagacgacacaggg
atgggagacgagggtgaggacagtaacgaaggcaccggcagtgcggacggcaatgatgga
tatgaagctgacgatgcggagggcggtgatgggactgacccaggtacagaaacagaagaa
agtatgggcggaggtgaaagtaatcagagagctgctgattcgcagaacagtggtgaaggt
aatacaggtactgcagagtcctctttttcccaggacatttctagagaacagcagccatca
tcagcatctgaaagacagactcctcgagcgcctcagtctccaagacgccccccacaccct
cttccgccacgactcaccattcatgctccacctcaagaattggggccaccagttcagaga
attcagatgactcggaggcagtctgttggacggggacttcagttgacccctggaattggt
ggcatgcagcatttttttgatgatgaagacagaacagttccaagtaccccaactcttgtg
gtgccacatcgtactgatggatttgctgaagcaattcattccccacaggttgctggtgtc
cctagattccggtttgggccgcctgaagatatgccacagacaagttcaagtcactctgat
cttggccagcttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagcg
catgaagaagagtcaggtggccgaagtgttcccactactcctctgcaagtagcagcccca
gtgacagtgtttacggagagcaccacatctgatacttcagagcatgcctctcagtctgtt
ccaatggtgacaacatccactggcactttatccaccacaaatgaaacagcagcaggtgat
gatggagatgaagtatttgtggaggcagaatctgaaggtattagttctgaagcaggccta
gaaattgatagccagcaggaagaagagcctgttcaggcatctgatgagtcagatcttcct
tctaccagccaggatcctccatccagctcttccgtagatactagcagtagtcaaccaaag
cctttcagacgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagttt
aacagacagagaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaat
attaattaa
DBGET
integrated database retrieval system
