Nematolebias whitei (Rio pearlfish): 119409210
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Entry
119409210 CDS
T08042
Name
(RefSeq) tropomyosin alpha-4 chain
KO
K09290
tropomyosin 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04260
Cardiac muscle contraction
nwh04261
Adrenergic signaling in cardiomyocytes
nwh04814
Motor proteins
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119409210
04820 Cytoskeleton in muscle cells
119409210
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119409210
04261 Adrenergic signaling in cardiomyocytes
119409210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119409210
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
119409210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
TMF_DNA_bd
Laminin_II
DUF3450
CALCOCO1
Cep57_CLD_2
ADIP
MscS_porin
COMM_HN
SNARE
Fib_alpha
DUF745
Motif
Other DBs
NCBI-GeneID:
119409210
NCBI-ProteinID:
XP_037531976
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Position
5:381734..426075
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AA seq
249 aa
AA seq
DB search
MSAGMNSIEAVKKKIKVLQEQAEEAEERAERLQKEVEKEKRSREEAEGEASSLNRRLQLN
EENLDRAQERLATALRKLDEVEKTADESERGMKVIENRALKDEEKMELQEVQLREAKLIA
EEADCKYEEVARKLVMVEGELERAEERAEQADRKSRLMEEELKTVFAGAKSLEAQADKYS
HKEDRYEEEIKKLSNKLKEAETRAEFAERTVAKLEKRVDGLEDALTAARNANMELQATLN
QTMEELNSC
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcatgaacagcatcgaggcggtgaagaagaagatcaaggttctgcaggag
caggctgaggaggccgaggagcgtgctgagcgcctgcagaaggaggtggagaaggagaag
aggagcagggaggaggcggaaggggaggcgtcgtctctaaaccggcgcttgcagctcaat
gaggagaatctggaccgggctcaggagcgactggctactgccctgcgtaaactggatgag
gtggagaagactgctgatgagagtgagagagggatgaaggtgatcgagaaccgagctctg
aaagatgaggagaagatggagctgcaggaggtgcaactgagggaggccaaactaatcgca
gaggaggccgactgcaaatatgaggaggtggcccgtaaactggtgatggtggaaggcgag
ctggaacgagccgaagagagggcagagcaggctgacagaaagtctcggctgatggaggaa
gagctgaaaaccgtgtttgcaggagccaagagtctggaggcgcaagctgacaagtactcc
cacaaggaggaccgctacgaggaggagatcaagaaactgagcaacaaactcaaggaggcg
gagaccagagctgagttcgctgagcgcactgtggccaaactggagaaacgggtcgatggg
ttggaagatgctctgactgcagccagaaacgccaacatggagcttcaggccacactgaat
cagaccatggaggagctgaactcctgctga
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integrated database retrieval system