Nematolebias whitei (Rio pearlfish): 119412977
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Entry
119412977 CDS
T08042
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04020
Calcium signaling pathway
nwh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119412977 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119412977 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119412977 (grin1b)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Glutamate (ionotropic)
119412977 (grin1b)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
119412977
NCBI-ProteinID:
XP_037535916
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All DBs
Position
8:2436386..2502674
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AA seq
913 aa
AA seq
DB search
MHRSVSLEERSVLLLAVLQCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVLQANALYG
KDKFKMNAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFY
RIPVVGLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGR
AAQKRLETLLEERETKAEKVLLFSQDTNLTALLLEAKDLEARVIILSASEDEAAAVYKAA
RHLNMTGSGYVWLVGEREMNGKALSEAPDGLLGLQLINGKNESAHITDAVAVVAQSLQEL
FEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDDGDRRFATYSILN
YQQKPGRLVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTKLKIVTIHQEPFVYVK
PTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPVVPQCCYGFCIDLLIKLAMSMNFTY
EVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFK
YQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSE
EEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAF
LVLDRPEERITGINDPRLRNPSEKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESA
AEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSL
AILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIE
IAYKRHKDARRKQMQLAFAAVNVWRKNLQADSPDPPESCRSSRVLQILQSPADSRKSDGP
QVSATLSSMLHQE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgctctgtcagcttggaggagcgcagcgtcctgctgctcgccgtgctgcagtgc
tgctcggtggcgctgtgcggctgcgagcctcgcctggtcaacgtgggcgccgtcctgagc
caaaagcgctatgagcaggtgttcaaggaggcggtgctccaggccaacgccctctacggc
aaggacaagttcaagatgaacgccatctctgtcacgcacaaacccaacgccatccagatg
gcgctgtccgtctgcgaggacctcatctccaaccaggtttacgccatcctggtcagtcat
cctccgcagtccaacgaccacctgactccaacgcctgtctcctacacggccgggttctac
cggattcctgtggttggcctgacgacgcgcatgtccatctactccgacaagagcatccac
ctgtcgttcctgaggaccgtcccaccgtactcccaccaggcccaggtgtggttcgacctg
atgagggagttcaggtggaaccacatcatcctgatcgtcagcgacgaccacgagggccga
gccgcccagaagaggctggagacgctgctggaggagcgcgagaccaaggcagagaaggtg
ctgctcttcagtcaagacaccaacctaacggcgctgctgctggaggccaaagacctggag
gcccgagtcatcatcctgtcagccagtgaggatgaagcagcagccgtgtacaaagcggcc
cgacatctcaacatgaccggttctggttacgtgtggctggtcggagagcgtgagatgaac
ggcaaagctctgagcgaagctccggatggcttgctgggcctccagctgattaacggtaag
aacgagtcggctcacatcacggacgccgtcgccgtggtggcccagtcgctgcaggagctg
tttgagaaggagaacatcacggagcctccacggggctgtgtgggaaacaccaacatctgg
agaaccgggccgctcttcaaacgggtgctgatgtcatcaaagtaccccgacggcctgacg
ggaagaatcgagtttaacgatgatggcgaccggcgcttcgccacctacagcatcctgaac
taccagcagaaacctggtcgcctggtccaggttggagtcttcaacggaacacaggttgtc
atgaaccctcagaggaaaatcatttggcctggaggagagacggagaaacctgtcggatac
cagatgtcaaccaaactgaagattgtcacgatccatcaggagccatttgtttacgtgaag
ccgacgaagagcgacggcacgtgtaaagaagagtacacggtcaacggagttctgatcaag
aaggtgatctgtactggacccaatgggaccataccaggtcagcccgtcgtccctcagtgc
tgctacggtttctgcattgacctgctcatcaagctggccatgagcatgaacttcacctat
gaggttcacctggtggctgatgggaaatttggaactcaagagcgagtgaacaacagcaac
aagaaggagtggaacgggatgatgggggagctgctggggggcctggccgacatgatcgtg
gcccccctgaccatcaacaacgagcgcgcccagtacatcgagttctccaaacccttcaag
taccagggcctcaccatcctcgtcaagaaggaaatccctcgcagcactctggactcgttc
atgcagccgttccagagcacactgtggctgttagtcggcctgtcggtccatgtggtggca
gtgatgctttaccttttagaccggttcagcccctttgggaggtttaaagtgaacagtgaa
gaagaagaagaagacgccctcaccctgtcctccgccatgtggttctcgtggggagttctg
ctgaactctgggatcggagaaggggctcccaggagcttctctgccaggatcctggggatg
gtgtgggcaggcttcgctatgatcatcgtagcatcgtacaccgccaacctggcagccttc
ctggtgctggaccggcctgaggagcgcatcactggcatcaatgaccccaggctgcgtaac
ccatcagagaagttcatctacgccacagtgaagcagagctcggtggatatctacttcagg
cggcaggtggagctgagcaccatgtaccggcacatggagaaacacaactacgagagcgcc
gccgaggccatccaggctgtccgagacaataagctgcacgccttcatctgggacagcgcc
gtgttggagttcgaggcgtcgcagaaatgcgatctggtgacgacaggagagcttttcttc
cgctctgggtttgggatcggaatgaggaaagacagtccgtggaagcagaacgtttctctg
gctattctcagttctcatgagaacggcttcatggaggatctggacaagacttgggttcga
taccaggagtgcgactccaggagcaacgcgcccgccaccctcaccttcgagaacatggca
ggtgtgttcatgctggtggcgggcggcatcgtcgcaggaatcttcctcatcttcatcgag
atcgcgtacaaacggcacaaagacgcccgcaggaaacagatgcagctcgcattcgccgcc
gtcaacgtttggaggaagaacctgcaggctgattctccagatcctccagagtcctgcaga
tcctccagagtcctgcagatcctccagagtcctgcagactctaggaagtctgacgggccg
caggtctcagcgacgctcagctcgatgctgcatcaggagtga
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