Nematolebias whitei (Rio pearlfish): 119414887
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Entry
119414887 CDS
T08042
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119414887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119414887
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119414887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Lebercilin
Med9
GAS
Motif
Other DBs
NCBI-GeneID:
119414887
NCBI-ProteinID:
XP_037537934
LinkDB
All DBs
Position
9:complement(14228820..14267815)
Genome browser
AA seq
2303 aa
AA seq
DB search
MALVLLQALERTELNKLPKGVQNKLEKFVTELQNANEALQTQHERFKADSEQQYFDIEKR
LAESQEQILSATKDLQVLKEENKKLNEELSTLRVEESEATEEKLPQQQTKTKYEIEAEKR
ELDRLLEKRAQEMENLTEDVKRLNEKLTETNKIKMELQLKLDDIQSSAASVQHREKLMEQ
EKELLEKKIEYLTTELKTKTDELLNTNREKGKEILELQGSLKSSSEQVATLESQLSSLRE
ISENQNKRAEDLNIKLKQAKDDQCAMEEKYRNELNAHVKLSSLYKGAATDTEAKNQELSR
AVEELSKLVKETGEVNKCLEKKVSGAEELKARLEAELKEKIKKLEKELENATMKAAGKHC
CVPSLTEDQLDSMCPSAAAIAAIVKPGMKFFDMYNAYAECQTQLQLEKQETRRVSKVLDE
IVHEVESKAPVLKRQREEYESMQRSMASLCNKLEQARAEIYSLQKEKDEVKQRCDVIERD
KLRTERLLDDTSDQLCSVLVELETVRGNQVPKDNGNSADISSTSEVSSSQVSFRSVSDLQ
RQNQTLLGRLRELEEEKDREQTSVTSARIKELESLVDKLQQECEQLKEQRNQQKQLADSN
ARQRDMFKVLLTQSTGFSLPPQGPGSASHPAPDRPSAPATRSTPQRATAAESAQTAQTKA
ALKQLNDAFTLYKKEKAENDRMLNETIDRLQRQLTELRSSRAKLSSQLEFSNKRYEILQE
TVLAYRREILALQERNQKMAATAQRHEHIIHTMSQDLRQTNEKLALEEVRVENLTKERDM
LRRAESRLSQEREAVLIEQHNQSLLLTNLKTIQLTMERTETETRQRLNSKVEQLETELTS
MKTRLERETAQRHALGRTMDAQLLEAKKQLETQNTLLQKTRELLRSSEQQVAALKTQPTS
ASSSEAAAASTTTPATRAAALRAPLRVRSPVPAAPQQLSQSEQELSEMKGLLQSAEEQNS
ELTEQLKNANATVEQYRSVVLTLEDSLKKEKELRSPLEVRLKESEEVQKQLEKRILELEK
MKQQEQEERRKAVDAVEKRVCELQRSLKASQAEQQEALERCTAAVTQEQQAIQDRHIQAK
LAGEAQSKYERELMLHAADVEALQQLKKTSQQEAARKTEIEEELKKTAALLQEKTTIWNT
MEKQLKEEKSSLSRRCEELGKQNALLHQQMDEMATKSRQLHQHPQQNLDLSFSEEGKTTE
QILEILRFVRREKEIAEAHYEASEGETQRYKQRVEHQNRELKELQEALNAEREKMQVTTK
TLAEQQEQLKRLETITSLQETNKMLKVDRDKLGQELQQAQAKVKKLQSDINPLHNSLSVL
SEKNGSLQADKRLLEEDLKRLKARVQQLVSQQKDGDLEEKQKLTAERETQLKRIAQLAEE
TGKLKTELARSNASSNSAQSQMQGLRESVTRLTSERDTLKKDVEVKNNDILEKNKTITQV
KKIGRRYKTQYEELKAQHDKLVSETASKAGSEAVPNQEAQQELNKVQEELEKTREELNTL
KEEAQKKQEEVQKSLQELEAAQKENQQTKEKLQEVQNQLTQNQNQLTQVQSQLSQTQTQL
QQNQNQLTQSQKDLQQAKGHTQQAQNQLKSVQSLAQNRQNQIQQVQRELQQAKEALQQNL
AKQKELQQTNQASQQSLSQEINNLKTSLSQAENKVTELQGKVDSLQKTVVEREADIKRLQ
EQLAEAKQAYEANQATQASQSSQSAQATDAKAATDANQVLQDELTKLKQELSESKSREEQ
LKQQMTEKEEKTKKAFLGAKLKINQVNSAKEQLNKENEELKQSKEEMEVRMNALKSQFEG
KCLRLERELKELRETQAHTEQREDSPDQSGAKVGDQTRSSDQRQISLKSPAQERGSSSVS
EPPTANIRPTQSTPSPGNKPSPSTGSKATPRASIRPMVTPATVPIATPTATVMPTTQTES
QEALVSTGPSVHSTSSTLVNAPASITQPTSTQTTAFVQPTQQQAASQDAGSSMEAERPTT
SSSITGAGSKRKVDEEEEESRPESSHAPTTKKLRLKPTIALQMEVEEEVDGELRDVREQL
DSPDGSQELPEEGFPVLAEDLEEEGISQSVPSDQGSQVSAIIRDVIVIDTDSESPEDQKQ
EGEEEEVQQEEEVEEEFKEGGDEEEDEDDAADSGIRGAEESNEESREAEEEQDEGPSDAT
NTEEVVSGASSGSQCSSEPTFSGEGSSSLMESEAPRDSIHIPPTCSSAHSLPSSSLTPRL
PHTRRLPHAVPPRLYIQAPAPELGPPHAQRQSSQLRRPSSGRGPQLTPGLATMPFFDDDD
RMVPSTPTLVVPHRTDGFAEAIQ
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgttttactacaggctctagagcggacggagctaaacaagcttcctaaaggc
gtccaaaacaagctcgagaagtttgtaacggagctgcagaatgctaacgaggcgcttcag
acgcagcacgagcggttcaaagcggacagcgagcagcagtactttgacattgagaagagg
ctggcggagagtcaggaacagatactttctgccacaaaagacctacaggttctgaaagaa
gaaaataaaaaactcaatgaagaactgagcacacttagggtggaagagagtgaggccact
gaagaaaagctgccacagcagcaaaccaagacaaagtatgagattgaagcggagaagaga
gagttggataggctgctggagaagagagcacaggaaatggagaacctgacagaggacgtg
aagcgactgaacgagaaactgacagaaaccaacaaaattaagatggaacttcagttaaaa
ttggatgacatacagtcctctgcagcttctgtacagcatcgagagaaactcatggaacaa
gagaaagagctgctggagaagaaaattgagtatttaaccacagagctgaagacaaaaact
gatgaactgttgaacaccaacagagagaagggcaaagagatacttgaactgcagggcagc
ctgaagagcagcagtgagcaggtggccacactggaaagtcagctcagttctttgagggaa
atcagtgaaaaccagaacaaaagagctgaagacctcaatatcaaactaaaacaggcaaaa
gatgatcaatgtgcaatggaggagaaatatcgcaatgagctcaatgctcatgtcaagttg
tcttcactttataagggtgcagcaactgacacggaggcaaagaaccaagagctgagcaga
gcagtggaggagctgagcaagctggttaaagaaacaggagaagtcaacaagtgtttagag
aagaaggtgtctggagcggaagagcttaaagcacggcttgaagcagaacttaaagagaag
atcaagaaactggaaaaggagctagaaaatgctacaatgaaggctgcaggcaaacactgc
tgtgttccctctctgacagaagaccagttggactccatgtgtccatcagcggctgctatc
gctgcgattgtcaagccaggcatgaagttctttgatatgtataatgcatacgccgagtgt
cagacacaactgcaacttgagaagcaggagaccaggagggtaagcaaagtcctggatgag
attgttcatgaggtggagtccaaagcacctgttctgaagcgccaaagagaggagtatgag
agcatgcagaggtccatggcatccttgtgcaataaactggaacaagctcgagcggagatc
tacagtttgcagaaggagaaggatgaggtcaagcagcgctgtgacgtcatagagagggac
aaactaagaactgagagactgctagatgatacatctgatcagctgtgctctgttctggtt
gagctggagacagtcagaggtaatcaggtgcccaaggacaacggcaactctgccgacatt
tccagcacgtctgaggtgagctcaagccaggtgtcgttccgcagtgtgtcggacctccag
aggcagaaccaaactctgttaggaaggctaagggagctggaggaggagaaggacagagag
cagacatctgtaacatcagcacgcataaaggagctggagtctcttgtggataaacttcag
caggagtgtgagcagctgaaggagcagagaaatcagcagaagcagctggcagactccaac
gccaggcagagagacatgttcaaggtgctgctgactcagagcacaggcttcagtcttccc
cctcaaggtccaggctctgcttctcaccctgcacctgaccgtccgtcggccccagccact
cgctccactcctcagagagccactgctgcagagtcagctcagactgctcagacaaaagct
gctttgaaacagcttaatgatgccttcactctgtataagaaagagaaggcagagaacgac
agaatgctgaacgaaacgatcgaccggctgcagaggcagctgaccgagctgcgctccagc
cgtgccaagctatcctctcagctggagttcagcaataagagatacgagattcttcaagag
actgtgttggcgtaccgcagagagattttggccctgcaagagaggaaccaaaaaatggct
gcaacagctcagagacatgagcacatcatccacactatgagccaggacctgaggcagact
aatgagaagctggctctggaagaggtgcgtgtcgagaacctgactaaagagagagacatg
ttaagacgggcagagtctcgtttaagtcaagaaagggaggccgtgctgattgagcaacat
aaccagagcctgctgctaactaacctcaagaccatacagttgactatggagcgtacagaa
actgagactcgtcagcgacttaacagcaaagtagaacaactggagacagaactgacatcg
atgaagaccagactggaacgggaaactgctcagagacatgcccttggacgcactatggat
gcacagttgttagaagcaaagaagcagctggagacccagaacaccctgctgcagaagacc
agggagctgctgcgcagctctgaacagcaggtggctgcgctgaaaactcagcccacgtct
gcttcctcttctgaggctgctgctgcctccacgaccaccccagccaccagagctgctgcc
ctccgagcaccactgagggtacgctctccagttccagcagcacctcagcaactcagccag
tcagagcaggagctctcggagatgaaaggtctcctacaaagtgctgaggaacaaaactct
gaactcacggagcagctgaagaatgccaatgccaccgttgaacagtatcgatctgtggtt
ctgactctggaagacagtcttaagaaagagaaagagttacgttctcctctagaggtcaga
ctgaaggagtcagaggaggtgcagaagcagctggaaaaaaggattttagagctggagaag
atgaagcagcaggaacaagaggagagaaggaaggctgtggatgcagtggagaaacgagtg
tgtgagctgcagcggagtctgaaggccagccaggcagagcagcaagaggcactggagagg
tgtactgctgctgtcacacaggagcaacaggccatacaggacagacacattcaggctaag
ctagctggagaggcacagtctaagtacgagcgtgagttgatgcttcatgccgctgatgtg
gaggctctgcagcagctgaagaaaacatcccagcaagaagctgcacgcaagacggagata
gaggaagaactgaaaaagactgctgctcttctgcaggagaaaaccacaatctggaacaca
atggagaaacagctgaaggaggaaaagtctagtctgagccgtcgttgtgaagagctgggg
aagcagaatgctctcctgcaccaacagatggatgaaatggccaccaagagtcgccagctg
catcaacacccgcagcagaatctggacctgtcgttcagtgaggagggaaagaccactgaa
cagatactggaaatactcaggtttgtacgacgagagaaggagattgccgaagctcattat
gaggcgtctgaaggagagactcaacgctacaaacagcgagtcgaacaccaaaacagagag
ctgaaggagctccaagaagcactgaatgctgagagggaaaagatgcaagtgacaacaaag
actttggctgagcagcaagaacagctgaagaggttggagacaatcacttctctgcaagaa
accaataagatgctgaaagtggacagggataaactgggacaggagcttcagcaggctcag
gctaaagtgaagaagctccaatcagatatcaacccactgcacaactctctgtctgtactg
tcagagaagaatggctccctgcaggctgataagaggctgctggaagaagacctcaaacga
cttaaggccagagtacaacaacttgttagccagcagaaagatggggatcttgaggaaaag
cagaaactcacagctgaaagagagactcagctaaagcgcatagcacagctagctgaagaa
acgggcaagctgaagactgagctggccagatccaacgccagcagtaattcagctcagtcc
caaatgcaaggcctaagagagtctgtgactcgcttaacgtcagaaagagacacccttaaa
aaagacgtggaggtgaaaaataatgacattctggagaagaacaagaccatcactcaggtg
aaaaagattggacgccgctacaagactcagtatgaggagctgaaagcccagcacgacaag
ctggtcagtgaaacggcttctaaagcaggaagtgaggcagtgccgaaccaggaagcacag
caggagctgaacaaagtccaagaggaacttgaaaagactcgagaggagctgaacaccttg
aaagaagaagcacaaaaaaaacaggaagaggttcagaagtccctgcaggagttggaagca
gcccagaaggaaaaccagcagaccaaagaaaagctccaagaggtccaaaaccagctgaca
cagaaccagaaccagctgactcaggtccagtctcagttgtctcagactcagactcaactg
cagcagaatcagaaccaactgacccagagccagaaggaccttcagcaagccaagggtcac
acccagcaggcacagaaccagttaaaatcagttcagtctctagctcagaaccgtcagaac
cagattcagcaggtccagagggaacttcagcaggctaaagaagcccttcaacagaacctc
gctaaacagaaagagcttcaacaaaccaaccaggccagccagcagagcctcagccaggaa
ataaacaatttaaaaacgtctctaagccaagctgaaaacaaagtgactgagcttcaaggc
aaagtggacagtctgcagaagacggttgttgagcgtgaagcagacattaaacgtctccag
gagcagctagctgaagcaaaacaggcttatgaagcaaaccaagcaacacaggccagccag
agttcccagtctgcccaggccactgatgctaaagctgccactgatgctaatcaggtgcta
caagatgaactgacaaaactcaaacaggagctgtctgaaagcaaaagcagagaggagcag
ctcaaacagcagatgactgagaaagaggagaagacgaagaaggccttcttaggagccaaa
cttaaaatcaaccaagtaaacagtgctaaagagcaactcaataaggagaatgaagaactg
aaacagagtaaggaggagatggaggtgagaatgaacgctctcaagtctcagtttgaagga
aaatgtttacgactggaaagagagctgaaagaactgagagagacacaggcccacactgaa
caaagagaagactctccagaccagagcggagcaaaggtgggtgatcagaccagatcttca
gaccagagacaaatttctttgaagagtcctgcccaagaaaggggaagctccagcgtttct
gagcctcccactgcaaacattcgacccactcaaagtactccgtctcctggtaacaagcca
agcccctccacaggaagcaaggccactcctcgtgccagcatcagacctatggttacccca
gcaactgtccccatagcaacccccacagcaacagtgatgccgactacacagactgagagt
caagaagctctggtgagtacaggaccatctgtacactccaccagctccactctcgtaaac
gctcccgcctccataactcagccaaccagcactcagaccacagcttttgtccaacctact
cagcagcaggcagccagtcaggatgcagggtccagtatggaggcagagcggcccaccaca
tcctcctccataactggagcaggttcaaagcgaaaggttgatgaggaagaagaggaaagt
agaccagagagttcccacgcaccaaccactaaaaaactacgactaaagccaacaatagcc
ctgcagatggaggttgaagaggaggtagatggagagctgagggatgtgagagagcagctg
gattcacctgatggcagccaggagctcccagaggagggttttccagttttagctgaagac
ctggaggaagagggcatttcccagtctgtcccctcagatcagggctcccaggtctctgca
ataattcgagatgttattgtgatcgacacggacagcgagagcccagaggaccagaagcag
gaaggagaagaagaagaagtgcaacaggaggaggaagtagaagaagagttcaaggaagga
ggtgatgaagaagaagatgaggatgatgctgctgacagcgggataaggggagctgaggag
agtaatgaggagagcagagaggctgaagaagagcaagatgaaggaccttctgatgccaca
aacactgaggaggttgtgagcggagcgtcttcaggctcccagtgttcctctgagccgaca
ttcagtggagagggcagcagttctctcatggagtcagaagcccccagggactctatacac
atcccccccacgtgctcctcggcacactctctgccctcatcctccctcacacctcgtctg
ccgcacacacgcaggctgccacatgctgtcccgcctcggctctacatccaagctccagct
cccgaactgggacccccccacgcacaaagacagtcctctcagctgcgtagaccatcttca
ggacgtggacctcagctaacccctggattagccacaatgcctttttttgacgacgatgac
agaatggttcccagtactcccactctggtggtcccacatcgcactgatggcttcgctgag
gcgatacagtaa
DBGET
integrated database retrieval system