Nematolebias whitei (Rio pearlfish): 119417403
Help
Entry
119417403 CDS
T08042
Name
(RefSeq) transcription factor E3
KO
K09105
transcription factor E3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119417403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119417403
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
119417403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
119417403
NCBI-ProteinID:
XP_037540533
LinkDB
All DBs
Position
11:complement(48892909..48911660)
Genome browser
AA seq
512 aa
AA seq
DB search
MAGAAGSDTSRSQALADLPIFSGILWSRVVNDPWALGGANIEGNTGYKPPVKQDGARLLA
VSVSEGVESGIVADIDVDCLIPTDSDTFYKIKSQPISISSSAAVSSSSSSSSLPSVMSSR
VLLRQDLMRQQALEEEQKEAQQQHRSSLDSSSPICVSVSSSSSSCKPAEVPVEVLKVQTH
LENPTKYHIQQAQRQQVRQYLSNTRTTSQQPSASVKPSHAPKLGSTLRQPMDSNSKNKME
ETIIDDIIGLESSFNDGFLSLMDSGLQLANTLPVSGNLLDVHGGMSTPTVVVSNSCPADL
HVVKREQSDVETKALIKERQKKDNHNLIERRRRFNINDRIKELGVLIPKSSDPETRWNKG
TILKASVDYIRKLQKEQQRARDMEDRQRRLENTNRSLLLRIQELEIQARLSGVSSSSSSP
HTSSLSPSPSVDPHTLLSHPSLSFMELDEPQAASIVFSPDLMSDMGLTELDGLGVLLTEE
ESGRVTVSDPLLSCGASKTSSRRSSFSMDEDV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctgccggttcggacacttccaggtcgcaggctctcgccgacctcccaatt
ttctccgggatcttgtggagcagagtggtgaacgacccctgggcactcgggggagcgaac
atcgaaggcaacaccggctacaaacctcctgtaaagcaggatggagcgcggctgctagct
gtttcagtttcagagggggtggagtctggaattgtcgctgatattgatgtcgactgtttg
attcctacagacagcgacactttctacaagatcaagagtcagccaatcagcatcagctca
tcggcagcggtttcctcttcatcgtcatcatcttcacttccgtcagtcatgtcatccagg
gttcttttgcgtcaggatctgatgcgtcagcaggctctggaggaggagcagaaggaggca
cagcagcagcatcgctcctccttggactcctcttcacccatctgtgtgtcagtgtcctcc
tcctcctcctcctgcaaacctgctgaggttcctgttgaggttctgaaggtgcaaactcac
cttgagaaccccaccaaataccacatccagcaggctcagagacagcaggttcgtcagtac
ctgtccaataccaggacaaccagtcagcagccatctgcgtctgtgaagccaagccacgcc
cccaagcttggctccaccctcagacagccaatggacagcaactccaaaaacaaaatggaa
gaaaccatcattgatgacatcatcggcctggagtccagctttaatgacgggtttctgtct
ctaatggactctggactgcaactggctaacacgctgccggtgtcggggaacctgctggac
gtgcatggagggatgtccacacccaccgttgtggttagcaacagctgtccggctgacctg
catgttgtgaagagagagcagagcgatgtggagaccaaagcactgataaaggagagacaa
aagaaggacaaccacaacctgatcgagaggaggagacgcttcaacattaacgaccgcatt
aaagaacttggagtgctgattcccaagtcctccgacccagaaacaaggtggaacaaagga
accatcctgaaggcctcggtggattatatccgcaaactgcagaaagaacaacagagagcc
agagacatggaggacagacagaggagactggagaacaccaaccgctcactgctactacgt
atacaggagttggagatccaggctcgcctgagtggtgtctcgtcttcctcctcgtcgcca
cacacgtcctccctctctccgtctccatctgtggatccacacactctgctgtctcacccc
tctctgagcttcatggagctggacgagccccaggcggcctccatcgtcttctccccggac
ctgatgtctgacatggggttgacggaattggacggcctgggggtgctcctgacagaggag
gagtctgggagggtgacggtgtccgacccgctgctatcctgtggagcctcaaagaccagc
agccggaggagcagttttagtatggatgaagacgtatga
DBGET
integrated database retrieval system