Nematolebias whitei (Rio pearlfish): 119417748
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Entry
119417748 CDS
T08042
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04510
Focal adhesion
nwh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119417748 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119417748 (lamb2l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Trimer_CC
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
119417748
NCBI-ProteinID:
XP_037540958
LinkDB
All DBs
Position
11:complement(44629192..44699434)
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AA seq
1832 aa
AA seq
DB search
MSTMTLHLSLLLLALTVFGQELPSSPHSCTEGSCYPATGNLLIGRAANLTATSTCGLHGP
EQYCIVSHLQEPDKCFECDSQHPYDPYRHRHSHRIQNVIYLMDGNEDHTWWQSFNGKEDV
SIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPGIPANG
LHQINNIICEERYSDIEPSTNGEVIFKVLDPAIPVEDPYSLDIQELLRITNLRINFTKLN
TLGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVNTREIGMIHGRCVCK
HNTEGLNCERCKDFHNDSPWRPAEPGEPHTCTKCNCNDHSSHCHFDLAVYLATGNASGGV
CNNCQHNTMGRNCEMCRPFYYQDPNRDVKDPHVCVACDCDPVGSLEGGVCDSHTDLNMGM
LSGQCRCKVNVKGMRCDSCKTGYYGLSQSDPLGCQACNCDPRGIIMTDAPCDQISGDCSC
KRYVTGRHCNQCLPEYWGISNDLGGCRPCDCDFGGAHNNRCMMDSGQCDCRRHLIGRQCS
GVQSGYFCAPLDLYKYEAEDATGLSPSDSSLSGKVRPQAADDCIQHLNNQARRHRRHRRI
SSSQPYQAALRRIRQLQQTPDVTTVHRERAPGHVVTWTGPGFARVKDGAGLMFTFDNIPI
AMEYDIMIRYEPESTEDWEAIVSITSVHLPSSSRCGNLLPTEQLYTETMLHHNRIVHMSR
PFCFEPSNRYVVTIRFQRHGVAHRHLTAFILIDSLVLIPKYTELTGFRGNGPAAEQHRDD
MIRYMCLDSFLITQMPTLAEMCTKLICSISSIIHDGALPCQCDPQGSVSGECEKVGGQCL
CKPNVIGRRCDQCAPATYGFEANGCTACNCHSEGSVSHQCDPVTGQCPCRQGATGRQCSD
CHPGQWGFPSCRPCQCNGHADICDSQTGECRECRDSTAGHLCDRCMDGFYGNPVLGSGDH
CRPCPCPGIPGSNHFNGHSCQADQTSDQIMCNCKQGYTGLRCDQCAPGFYGNPERPGGLC
LPCECNNNIDPQDPGSCDPRTGQCLRCLYHTDGPSCSHCEHGYFGNALSQDCRRCTCVPS
GTVESACSDGQCHCDRQTGVCPCRENVVGHGCDQCAPDYWNYGQDRGCEPCHCDHHHSLG
THCNLFTGQCHCHPGFGGQHCTECEQLHWGDPQVECRECNCHPLGSETAQCDRETGQCEC
REGAVGRHCDQCARGFMGVFPSCVQCHPCFQLWDDHVCQLRRDLEHIQYMVQKILESGIT
PGAEDARIKELERKLSQVRDLISSVDTDTIQQLIGQSVDDLSTEILLTNGRLTDISHELN
STAGRDEDLKRTLSDLEKELRDINATVAHKQQVLDDRLTSGFADQFEKIKKYYLDSKVSD
ADSILEQSNRTRARTEKLLNEREDKFLQVLATQNSSLNELHNKTQDLDKEVQRLSNKVCG
GHNNASVNGSCPESRCGGAGCRDNQGEHVCGGEGCNGTTSTSLAALNVAQNASDNLNAAN
KELQRVSKKLKDIAALTNDVKNQAMTSLEKAQKKKEYFENNNKNLKDFIKTIRNFLTEEG
ADPDSIQKVASQVMDIKLPFNLTTLNKIIMQIKESLSNLTNVEGVVNQTSHLIKNAQELL
EKAKEAKSRAVSVNDRVNSTKQALNVSEEAIVKARIALKEAHDNLNISKNATAEVEWTLQ
QLEDKQMDIMMRLSNLSVGVEALRNKTEMNRQMAKDALDLANNATHQASSLGKSFNNTEK
RFEELKIKIASLGPESGTLENIHQRARNMKKDAEDLLNKAKNGIKLLKDLEQKFKNNEDR
MQKQRIELDGLQYNATLVRDSIRGELQKYTNC
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatgacgctgcacctgagcctcctcctgctggctctgaccgtgtttggccag
gagctgccgtcgagccctcacagctgcaccgagggaagctgctatcctgcgacaggaaac
cttctgattggacgagctgccaatttaaccgccacctctacctgcggtctgcatggaccg
gagcagtattgtatcgtcagccatttacaggagcccgacaaatgtttcgagtgcgactcc
cagcatccctacgacccgtaccgccacagacacagccaccgcattcaaaacgtcatctac
ctcatggacgggaacgaagaccacacctggtggcagtcattcaacggtaaggaggacgtc
agcatcaggctgaacctggaggctgaatttcacttcacacatctcatcatgaagttcaag
actttccgccccgcagcgatgatcattgagcgctcggcagattttggccgcacgtggcgc
ccctaccgctactttgcctccaactgcaccagaactttccccgggatccccgccaacggc
ttgcaccaaataaacaacatcatctgcgaggaacgttactccgacatcgagccctcgact
aacggagaggtcatttttaaagttctggacccggccattcctgtagaagacccctacagc
ctggacattcaagaacttttgcgcattaccaacctgcgaattaacttcacaaagctcaac
accctgggagacgacctgctggaccgtcgctcagacgtcctgcaaaaatattactacgcc
atttatgagctggttgtccgagggagctgcttttgttatggacacgcttctgagtgcgcc
ccggtgccgggggtgaacacccgggagatcggcatgattcacggccgctgcgtttgcaaa
cacaacactgaaggactgaactgcgagcgctgcaaagacttccacaacgactctccctgg
agaccagcggagcccggagagccacacacctgcacaaagtgcaactgcaacgaccactcg
agccactgccactttgacttggccgtgtatttggcaacgggcaacgctagcggaggagtt
tgcaacaactgccagcacaatacgatgggacgcaactgtgagatgtgcagaccgttctac
taccaagaccccaacagggacgttaaggacccacatgtttgtgttgcctgtgactgtgac
ccggtgggatcgttagaggggggtgtctgtgacagccacactgacctgaacatggggatg
ctcagtggacagtgtcgctgcaaagtaaatgtaaaaggcatgcgctgcgacagctgcaag
acgggctattacggactcagccagagcgacccactcggctgccaggcttgtaattgtgat
cctcgtggcatcattatgacggacgctccttgtgatcagatcagcggagactgctcctgt
aaaagatacgtcacaggtcgtcactgcaaccagtgtctgcctgaatactgggggatcagt
aatgacctggggggctgtagaccttgtgactgtgactttggtggagcccacaacaacagg
tgcatgatggacagtgggcagtgtgactgcaggaggcatttgattggtcgacagtgctca
ggggtgcagtctgggtatttctgtgctcctcttgacttgtacaagtacgaggctgaagat
gccacaggactctcccccagcgactcctccctgtcgggcaaagtccgtcctcaggcagcc
gacgactgcatccagcatctcaataaccaggcgaggaggcaccggagacaccggcgcatt
tccagctcgcagccgtaccaggcagccctgagacgcatccgtcagctccaacaaacaccg
gatgtgacgacagttcatagagagcgcgctccgggccacgtggtgacatggaccggacct
ggttttgctcgcgttaaagacggcgccggcctgatgttcacttttgacaacatccccatc
gccatggagtatgacatcatgatccgctatgaacctgagtccacggaggactgggaggcc
atcgttagcattacctccgttcatctgccctcaagcagccgatgtggaaacctgctaccg
actgagcagctctacactgaaaccatgctgcaccacaacagaatcgttcacatgtccaga
ccattctgtttcgagcccagcaatcgttacgtggtcaccatccggttccagcgacacggc
gtcgcacaccgacacctaactgcttttattctcatcgactcgctggtactgatccctaaa
tacacggagcttacgggtttccgcggcaacgggccagcggcggagcagcaccgggacgat
atgatccgctacatgtgcctggattccttcctgatcacacagatgcccactctggccgaa
atgtgcaccaaactcatctgcagcatctcatccatcattcacgatggcgctctgccctgt
cagtgtgaccctcagggctccgtcagcggtgagtgtgagaaggtcgggggtcagtgtctc
tgtaaacccaacgtcatcgggcggcgctgcgaccagtgcgctccagcaacctacggcttt
gaagcaaacggctgcacggcttgtaattgccactccgagggctctgtgagtcaccagtgt
gacccagtcacaggccagtgcccgtgcagacaaggagccaccgggcgccagtgctctgac
tgccatccgggccagtggggcttccccagctgcagaccctgtcagtgcaacggccacgca
gatatctgtgactcccaaaccggggaatgcagagagtgcagggacagcacagcaggacac
ctctgtgatcgttgcatggatgggttttatgggaacccagtgcttggctcaggggaccac
tgtcgcccctgtccttgtcctggtatccctggttcaaaccattttaatggacattcctgt
caggctgaccaaacctctgatcagatcatgtgcaactgtaaacaaggctacacaggtctc
cgctgtgatcagtgtgcccctggtttctatggcaacccagagcggccaggagggctgtgt
ctgccatgtgagtgcaataacaacatcgacccccaggatcctggatcatgtgaccccagg
acaggccagtgtctgcggtgtctgtaccacacggacggcccttcctgttcccactgtgaa
cacgggtattttggcaacgccttgtcccaggactgcagacgttgcacctgtgtgccttct
ggcactgtggagtccgcctgcagtgacggacagtgtcactgcgaccgtcagactggagtc
tgtccttgcagagagaacgtggtcggccatggctgcgaccagtgcgctcctgactactgg
aattacgggcaggacagaggctgcgagccctgtcactgtgatcatcaccactccctggga
actcactgcaacttgttcacaggtcagtgccactgtcacccaggattcggaggccaacac
tgcacagagtgcgagcagcttcactggggagacccgcaggtggagtgtcgagagtgtaac
tgccacccgctgggttcagagaccgcccagtgtgaccgagaaacgggccaatgcgagtgt
cgggagggcgcagtggggaggcactgcgaccagtgtgcacgtggcttcatgggcgtcttc
cccagctgcgtccagtgtcacccgtgcttccagctgtgggacgaccacgtgtgccagctc
aggagggacttggagcacatccagtacatggtgcagaagatcctggagagcgggatcacg
cccggagccgaggacgctcgcatcaaggagctggagaggaagctgagtcaggtgcgggat
ttgatcagtagcgtggacacggacacgatccagcagctgatcggacagagcgtcgacgac
ctcagtactgagattctcctcaccaacggacgtctaacggacatcagccatgagctgaac
tccactgcaggacgggatgaagacttaaaacgtaccctgagtgatttagagaaagagctg
agggacattaatgctactgtggctcacaaacagcaggtgctggatgaccgtctcacctcg
gggtttgcagatcagtttgagaaaatcaagaagtactacctggactccaaggtgtctgat
gcggacagtattttggaacagtccaaccgtacccgagcacgcaccgagaagctgctgaat
gagcgcgaagacaagttcctccaggttctggcgactcagaacagttcattaaatgagctg
cacaataaaactcaagaccttgataaggaagttcaacgtctcagcaacaaggtatgtggc
ggtcacaacaatgccagcgtcaatggcagctgccctgaaagccggtgcgggggcgcaggt
tgccgtgacaatcagggtgagcatgtatgcggtggagagggctgcaacgggacgacgagc
acgtctctggcagcgctcaacgtcgcccagaatgcctcagacaatctgaacgctgccaac
aaggagctgcagcgagtctcgaagaagctcaaagatatagctgctctgacgaatgatgtg
aagaatcaggcgatgacctcgctggagaaggcccagaagaagaaggagtactttgaaaac
aacaacaagaatcttaaagatttcataaagactattagaaacttccttactgaggaggga
gctgatcccgacagcatccagaaggtggcaagtcaagtcatggatatcaaacttcccttc
aacttgacgactctgaacaaaatcatcatgcagataaaggaaagtctctccaacctcacc
aacgtagagggcgttgttaatcagacctctcatctcatcaaaaatgcccaggagctgctt
gaaaaagcgaaagaagccaagagccgagcagtgtcggtgaatgatcgtgtcaatagcacc
aagcaggcactgaatgtgtcagaggaggccatagtgaaagcaaggattgctctgaaggag
gcccatgacaacctgaacatctcaaagaatgccacagctgaggtggaatggacactgcag
cagcttgaggacaagcagatggacatcatgatgcgtttgagcaacctctccgtgggggtg
gaggctctcaggaacaagacagagatgaacaggcaaatggcgaaagacgccctagacctg
gctaataacgccactcaccaagcatcctcactgggcaagagcttcaacaacacagagaaa
cgtttcgaggagctgaagataaagattgcatctctggggccggagtctggaacactggag
aacatccaccaaagggccagaaatatgaagaaggatgcagaggatctcctgaacaaagcc
aagaacgggataaagctactcaaagatttggagcaaaagttcaagaataatgaggaccgg
atgcagaaacagcgcattgagctggacggcctgcaatataacgccactctggtgcgagac
tcgatccgaggagagctgcagaagtacaccaactgttag
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integrated database retrieval system