Nematolebias whitei (Rio pearlfish): 119426847
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Entry
119426847 CDS
T08042
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119426847 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119426847 (chrnd)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119426847 (chrnd)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119426847
NCBI-ProteinID:
XP_037550358
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All DBs
Position
20:33373285..33380481
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AA seq
520 aa
AA seq
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METKALVSLFLLTLLYAGCLCRNEEERLINYLFKEKGYNKELRPVEQQKDAVDVFLALTL
SNLISLKEVDETLLTNVWIDHTWKDYRLKWNVSEFDGIEMLRLPPSMVWLPEIVLENNND
AQFEVAYYSNVLVQYDGLCYWLPPAIFRSSCSINVNYFPFDWQNCTLKFTSLTYNAKEIK
MMLKETNDTILYTVEWIIIDPEGFTENGEWEIVHRPAKRNTYKHIPMESNKHQDITFYLI
IKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQRLPE
TSTSVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMTDWTKRFFLERLPRILRM
SRPADDEPTWDNALPRRSSSVGYIAGAEEYYSIKSRSELMFEKQSERHGFAKRPTHAAVV
KPQDEDGVTDQLYGEIKPAVDGANYIVKHMHNKNDYNEEKDNWSGIARTVDRLCLFLITP
VMTFGTIIIFLMGLCNNPPYLPFKGDPYNYKDDNPRLLSN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagactaaagctctagtctctttgttcctgctcacgctgctctacgccgggtgtttg
tgcaggaacgaggaggaacgtctgatcaactacctgttcaaagagaaaggctacaacaag
gagctgcgacctgttgaacagcagaaggacgccgttgatgttttcctcgctctcactctc
tctaacctcatctccctgaaagaagtagatgagacgctgctgacaaatgtgtggatcgat
catacatggaaagactacaggctaaagtggaatgtgtcagagtttgatggcattgaaatg
cttcgcctaccgcccagcatggtgtggctgccagagattgtactggagaacaataatgat
gcccagtttgaggtggcctactattccaatgttctggtgcagtatgatggtctctgctac
tggttacctcctgccatcttccgctcttcttgttccatcaatgtcaactacttccccttc
gactggcagaactgcacgctcaaattcacctctttgacgtacaatgctaaagagatcaag
atgatgctgaaggaaacgaacgataccattctgtacactgtggagtggatcattatcgac
ccagagggcttcacagagaatggcgagtgggagatcgtccaccgtccagccaagaggaac
acctacaagcacatccccatggagagcaacaagcaccaggacatcaccttctacctgatc
atcaaacgcaaacctctcttctacatcgtcaacatcatcatcccctgcgtcctcatctcc
ttcctggcctcgctcgtctactacctgcccgccgacagtggtgagaagatgacactgtcc
atctctgtgcttctggctcagtctgtcttcttgctgctgatttctcagagactgccggag
acgtccacgtccgtcccactcattgtaaagtatctgatgttcatcatggttctggttacg
gtggtcgtgttgaactgcgtcgtcgtcctcaacctgcacttccgaactccgagcacacac
gtcatgaccgactggaccaagaggtttttcctggagcggttgccccggattctgcggatg
tcccgtcccgcggacgatgagcccacatgggacaacgcgctgccacggcggtccagttcg
gtgggatacattgcaggtgcggaggagtattacagcatcaagtcccgcagcgagctgatg
ttcgagaagcagtctgagaggcatgggtttgccaaacggcccacgcacgccgcagtggtg
aagccgcaggacgaagacggcgtgacagatcagctgtacggagagatcaaaccggccgtg
gacggagccaactacatcgtcaaacacatgcacaacaagaacgactacaatgaggagaag
gacaactggagcgggatcgcccgcacggtggaccggctctgcctcttcctcatcactccg
gtgatgacgttcggcaccatcatcatctttctgatgggactctgtaacaaccccccatac
ctgcccttcaaaggagacccgtacaactacaaggatgacaacccacgcctgctgagtaac
tga
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