Nocardia yamanashiensis: LTV02_37260
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Entry
LTV02_37260 CDS
T07935
Symbol
pcaD
Name
(GenBank) 3-oxoadipate enol-lactonase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00362
Benzoate degradation
nya01100
Metabolic pathways
nya01120
Microbial metabolism in diverse environments
nya01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LTV02_37260 (pcaD)
Enzymes [BR:
nya01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
LTV02_37260 (pcaD)
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Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
Lyase_1
Abhydrolase_6
Hydrolase_4
ADSL_C
Peptidase_S15
Ndr
Abhydrolase_4
UPF0227
Esterase
Motif
Other DBs
NCBI-ProteinID:
UGT41518
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All DBs
Position
8068915..8071149
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AA seq
744 aa
AA seq
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MSELFGPLQAAGPAAQATDDAAWLQALLDAEAGLAWAQADTGLIPLEHAAAIAAACRADL
YDAAEIGRAATGIGNPAAPLVRALTARVADREAAGSVHLGATSQDIMDTAAMLVADRVID
ACWDDVTACRTMLAGLAEQHMCTPQAGRSLLQQALPVTFGLTAAGWLSALESAADQLERI
QRERLAVQLGGAVGTLAALGQAGPDVLSAYARRLDLPDPGLPWHTDRVRIAELAAALGTV
ASVVAKVARDITLLAQTEIGEVSEIAPGAGGSSTMPHKRNPIAAVGAAAAAARAPGLVAT
LLAVSAHEHQRAAGAWHAEWRPLNELLRCTGTAVHWLRTSLCRLRVHPRVMRRNLAGTGG
LLMSEQVTAALTPVVGRLAAHDAVTACALRAADGSGDFADLLLTHPLLAPHLNRARVGAL
LEPSTYLGSARIFAERALAAHRRRGRDAAAEYAGADATGRHSGADVTHLGARCGAGESGR
VDSGAAGRAVEVRAEVRGAAEGTPVVLLNALGSDMRIWDSYVRPLVDNGFRVIRFDARGH
GDSPVPAGPYRVADLGADVEALLDWLGVESAHLVGVSLGGMTAMWLAAHRPHRVRGLVAC
CTSARPGNAAGWIERAAEARAEGMGEIAEASVARWFTPQWRAANPEITTRMRELTTDTPP
EGYAACCEALAGLDLSAELARIGAPTLVLSTEQDPAFPPEHGRDIAARIPGARFESIDGA
AHLGTVEQPERFLPLIIDQLRRIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttgttcggcccgttgcaggcggccggtccggcggcgcaggccaccgacgac
gccgcctggctccaggcgctgctggacgcggaagcgggactggcctgggcgcaagccgat
accgggctgatccccctggagcatgccgccgcgatcgccgcagcctgccgtgccgatctc
tacgacgccgccgaaatcggccgcgcggcaacgggtatcggcaatcccgccgcaccgctc
gtccgggcgttgaccgctcgcgtcgcggatcgcgaagcggcgggatcggtgcacctgggc
gcgacgagtcaggacatcatggacaccgccgccatgctggtggcggaccgcgtcatcgac
gcctgctgggacgacgtgacggcctgtcgcaccatgctggccgggctggccgaacagcac
atgtgcaccccgcaggccggtcgcagcctgctccagcaggccctgcccgtcaccttcggc
ctcaccgccgcgggctggctctcggcgctggaatccgctgccgaccagctcgagcggatc
cagcgcgagcggctggcggtccaattgggcggagcggtaggaactctggccgcgctcggt
caggccggtcccgacgtcctttccgcctacgcccgccgcctcgacctgccggaccccggt
ctgccctggcacaccgaccgggtccgcatcgccgaactggctgcggcattgggcaccgtc
gcgagtgtcgttgccaaggtggcccgcgatatcaccctgctcgcccagaccgagatcggc
gaagtctccgagatcgcgccgggcgcgggtggatccagcaccatgccgcacaagcgcaat
cccatcgcggcggtcggtgccgccgccgctgccgcacgggctcccggactggtggcgacg
ctgctcgcggtctcggcgcacgagcatcagcgcgcggcgggagcctggcacgccgagtgg
cgtccgctgaacgaactgctgcgctgcaccggaacggccgtgcactggctgcggaccagc
ctgtgccggttacgtgttcacccgcgcgtcatgcgccggaatctggccggcaccggcggc
ctgctcatgtccgaacaggtcaccgccgccctgacgcccgtggtggggcggctcgccgcc
cacgacgcggtcaccgcctgcgccctgcgcgccgccgacggcagcggcgacttcgccgac
ctgctgctgacccacccgctgctcgccccgcacctgaatcgcgcccgcgtcggcgcgctc
ctcgaaccgtcgacctacctgggcagcgcccggatcttcgcggaacgcgccctggccgca
caccggcggcgcggacgcgacgccgcagccgagtatgccggcgctgacgccaccggccgg
cactccggagcagacgtcacccacctcggagcccgttgtggcgcaggggaatccggccgt
gtggactccggcgccgccgggcgcgctgtcgaggtacgggccgaggtgcgtggtgcggcc
gagggaacgccggtggtgcttctcaacgcgctgggtagtgacatgcggatttgggattcg
tacgtgcggccgctggtggacaacgggtttcgggtgattcggttcgatgctcgcggacat
ggggattcgccggtaccggcgggaccgtatcgggtcgcggatctgggggcggatgtggaa
gcgttgctggattggctgggagtcgaatccgcgcatctggtgggggtttcgctcggcggc
atgaccgccatgtggctggccgcgcaccgcccgcatcgggttcgcgggctggtcgcgtgc
tgcacctcggcccggccgggcaatgccgccggatggatcgaacgcgcggccgaggcgcgg
gccgaaggtatgggtgagatcgcggaagccagtgtggcgcgctggttcacgccgcagtgg
cgcgccgctaatcccgaaatcaccacgcggatgcgggaattgaccacggatacgccgccg
gaaggctacgcggcgtgttgtgaggcgctggcggggctggacctcagcgccgagctggct
cggatcggcgcgccgacgctggtcctgtccacggagcaggatccggccttcccgccggag
cacggccgggacatcgcggctcgcattcccggcgcgcggttcgaatccatcgacggcgcg
gctcatttgggcaccgtcgagcagcccgaacgttttcttcccctgatcatcgaccagctg
aggcggatcccatga
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