Nitrosopumilus zosterae: NZOSNM25_001695
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Entry
NZOSNM25_001695 CDS
T08647
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NZOSNM25_001695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001695
Enzymes [BR:
nzt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NZOSNM25_001695
Transcription machinery [BR:
nzt03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NZOSNM25_001695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
FYVE_2
MRNIP
Zn_Tnp_IS1595
OrfB_Zn_ribbon
Ribosomal_L37e
Motif
Other DBs
NCBI-ProteinID:
BDQ31573
LinkDB
All DBs
Position
complement(1403184..1406531)
Genome browser
AA seq
1115 aa
AA seq
DB search
MADPSTKRWPVIQDILKREGIARQHLNSFDEFLERGLQSIINEVGQIDIENAEYPYKIQL
GKVKLQQPRMMELDGSITHITPAEARLRNVSYSAPVMMEASVVEDGKILESRFVHIGDVP
VMAKSNACILHNFSTQKLIEHGEDPNDPGGYFIINGSERVIVGLEDLSYNKIIVDRETVG
GNIVFKAKVYSSIVGYRAKLELVMKNDGLIVARIPGSPVDIPVVTLMRALGLESDREIAA
VVSLVDDLQDELEGSFEKAGDVPTSKDAIVYISKRIAPGMLEEFQIKRAETLLDWGLLPH
LGKHPENRKEKAQFLGEAACKLLELKLGWITPDDKDHYGNKVIKFAGQMLADLFRTAFRN
LVRDMKYQLERSGQKRGINAVAAAIRPGIITDKLNNAIATGNWGRGRVGVTQLLDRTNYL
STISHLRRIQSPLSRTQPNFEARDLHATHFGRICPSETPEGSNCGLVKNLALSGIISVNV
PSEEIVEKLYDLGTVHFFDAKEDLKKDGTRVFVDGRLIGYFKDGQEIAESLRELRRNSKI
HPHVGVSFHKSDIEGSTRRLYVNCNAGRVLRPLIIIKDNKSLLTQDLLDKISKKLLSWTD
LLRMGVLEMIDANEEENCYVTLDEKDTKKHTHLEVFPPAILGAGASIIPYPEHNQSPRNT
YESAMAKQSLGFSTPMMNTSTYVRQHFMLYPQVPIVNTKAMKLLGLEDRPAGQNCVVAVL
PFDGYNIEDAIVLSKASVDRGLGRTFFFRIYDAEAKQYPGGMRDTFEIPNAEDNIRGYKG
ERAYRLLEEDGVVASEAPVKGGDILIGKTSPPRFMEEYREFESSGPYRRDTSIGVRPSET
GVVDTVVMTQSNEGGKMYKIRARDMRIPEIGDKFASRHGQKGVLGILAKAEDLPYTAEGM
SPDVLINPHAFPSRMTVGMMMESICGKAAAFRGKRFDGSAFVGEKMDEVKEVMDAHNFKY
SGKEIMYDGRTGKPFPVDVFIGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGG
GLRFGEMERDCLIAYGASMILKDRLLDESDKSDIFVCERCGLVAYHDVKQRKYVCRVCGD
KAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIKEKI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccatccacaaagcgttggccagtaattcaagatattctgaaacgtgagggt
attgcacgtcaacacctaaactcatttgatgaatttctagagagaggacttcaaagtatt
atcaatgaagtaggacaaattgatattgaaaatgctgaatacccttacaaaattcaacta
ggtaaagtcaaacttcaacaaccaagaatgatggaacttgatggttctattactcatatt
actccagctgaggcacgattgagaaacgtttcatattctgcccctgtcatgatggaggca
agtgttgtagaggatggaaaaattttggaatccagatttgttcatattggcgatgtacca
gtaatggcaaaatcaaatgcctgcatcttacataatttctctactcaaaaattaattgaa
catggtgaggatcccaatgatcctggtggttacttcatcattaatggttcagaaagagta
attgtaggattagaagatctttcttacaataaaattattgtagatagagaaactgttggt
ggaaatattgttttcaaagctaaagtatattcatcaattgttggatatcgtgcaaaatta
gaacttgtaatgaaaaacgatgggttgattgtagctagaattcctggttctccagttgat
attccagttgtcacattgatgagagcacttggattagaatctgatagagaaattgcagca
gttgtctctttggtggatgatcttcaagatgaactggaaggctcttttgaaaaagcggga
gatgttccaacatctaaagacgccattgtttacattagtaaaagaattgcacctggaatg
ttggaggaattccaaattaaacgtgcagaaactttacttgattggggattgttgccacat
ttgggtaaacatccagaaaatagaaaagaaaaagcacaattcttaggtgaagccgcttgt
aaattattagaattaaaacttggttggattacccctgatgacaaggatcattatggaaac
aaagtaatcaaatttgcaggacaaatgttggcagatctctttagaactgcgtttaggaat
ttggttagagacatgaaataccaattagaaagatcaggtcaaaaacgaggaattaatgca
gtagctgctgcaattcgtcctggaattattactgacaaactaaacaatgcgatagctact
ggaaactggggacgtggacgtgttggtgttactcaattacttgatagaacaaattatctt
tcaacaattagtcatcttagacgaattcaatctcctcttagtagaacccagcccaacttt
gaggcaagagacttgcatgcaactcactttggaagaatatgtccaagtgaaactcctgaa
ggctcaaactgtggtttggtgaaaaacctcgctctatctggaattatctcagtgaatgtt
ccatcagaagaaattgtggaaaaactctatgatcttggaactgttcatttctttgatgcc
aaagaagatttgaaaaaagatggaaccagagtttttgttgacggtcgtttaattggatat
ttcaaagatggtcaagagatagctgaatctctcagagaactcagaagaaattcaaagatt
catcctcatgttggagtgtcatttcataaatctgatatcgaaggttcaacaagaagactt
tatgtgaattgtaatgcaggacgtgttttacgaccattaataattatcaaagataacaaa
tcattgttaactcaagatttgttagataaaatctccaagaaattactttcctggactgat
cttttgagaatgggagttttggaaatgattgatgcaaatgaagaagaaaactgttatgtt
acattagatgaaaaagatacaaagaaacacactcaccttgaagtattccctccagcaatc
ttaggtgcaggagcttctatcattccgtatccagaacataatcaatctccaagaaataca
tatgaatctgcaatggcaaaacagagcttaggattttcaacacctatgatgaatactagt
acatatgttagacaacactttatgctatatccgcaagttccaattgtaaatacaaaagca
atgaaactcttgggattggaagatagaccagcgggtcagaactgtgttgttgcagtactt
ccattcgacggatataacatcgaagatgcaattgttcttagcaaagcatctgtagatagg
ggattgggaagaacattcttctttagaatttatgatgctgaagcaaaacaataccccggc
ggaatgcgtgatacctttgagattcctaacgctgaagataacattagaggttacaaggga
gagcgtgcatatagattacttgaagaagatggcgttgttgcatcagaagctccagtaaag
ggcggagatattttaattggaaaaactagtcctccaagatttatggaagaatatagagag
tttgaatcatctggtccatacagaagagatacttctattggtgttagaccatctgaaaca
ggagttgtagatacagtagttatgactcaatcaaatgaaggtggaaaaatgtacaagatt
cgcgcaagagatatgagaattcctgaaattggtgataaatttgcatcaagacatggacaa
aagggtgtacttggaattttagccaaagccgaagacttgccatatactgcagaaggtatg
tctcctgatgttttgattaatcctcacgcatttccatctagaatgaccgttggaatgatg
atggaatctatttgtggcaaggctgctgcatttcgtggaaagcgatttgatggctctgca
tttgtcggagaaaaaatggatgaagtaaaagaagtaatggatgcacacaatttcaaatat
tctggcaaagaaataatgtatgatggtagaactggaaaacccttcccagtagatgtcttt
attggagttgtatattatcagaaactccatcatatggttgctgacaaaatccatgcaaga
gcacgtggacaagttcagatgttaactaaacaaccaactgaaggtagagcaagaggtggt
ggtttaagattcggtgaaatggagagagactgtttgattgcttatggagcttctatgatt
ctaaaagatagattacttgacgaatctgataaatctgatatttttgtctgtgaaagatgt
ggattggttgcttatcatgatgttaaacaaagaaaatatgtatgtcgggtttgtggtgat
aaagccaaagtctcttcagtctcagtggcgtatgcattcaaactactcttacaagaaatg
cagagtcttaatgtcgcaccacgtctattaatcaaggagaaaatctaa
DBGET
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