Ornithorhynchus anatinus (platypus): 100086954
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Entry
100086954 CDS
T01045
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03020
RNA polymerase
oaa03420
Nucleotide excision repair
oaa05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100086954 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
100086954 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100086954 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100086954 (POLR2A)
03400 DNA repair and recombination proteins [BR:
oaa03400
]
100086954 (POLR2A)
Enzymes [BR:
oaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100086954 (POLR2A)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100086954 (POLR2A)
DNA repair and recombination proteins [BR:
oaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100086954 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ATG16
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
100086954
NCBI-ProteinID:
XP_028911393
LinkDB
All DBs
Position
X5:complement(6912616..6927676)
Genome browser
AA seq
1966 aa
AA seq
DB search
MHGGGTPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
ANNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEELVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPQPHGGLSRHDALEPGGHAGLRSLVPQRRQRHDPGGRRLLAQRRLRRQRLQPRL
LSGLVSDPGLPGLPRPVQPLHPLSGGGHVAQLLADVSGLRAPLPRGLHSAEPLLQPHLPL
LQPHLPFLLPHQPQLQPHLPQLQPDVTQLLPHLSELQPHLPQLQPDLPQLQPDLPELQPD
LAELQPHLAQLQPHLAQLQPDLPQLQPHLPQLQPHLPQLQPDVSELQPDVPELQSHLPQL
QPHLPQLQPHQPQLYPDVAQLQPDVAQLQPDVAQLHPDVAQLQPHLPQLQPHLPQLQPHL
PQLQPVQPPLHPPSPRPTPPSSPATVLPHPSTPATSPSYSPSSPEYTPTSLQVLAPPAPS
TRPPAPSTRPPAPPTRPPPPSTHPPAPPTRPPPRSTRPPAPNTRPPAPPTRPPAPSTQPT
SPSATPPTRPEGSTYSPPPRGTRPPGPHLQPSPARPSAPTDSDEDN
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggggggaccccttccggagacagcgcatgcccgctgcgcaccatcaagcgg
gtgcagttcggagtcctcagccccgatgagctgaaacggatgtcggtgacggaggggggc
atcaagtacccggagacgaccgagggggggcgccccaagctcggggggctgatggacccg
cggcagggcgtgatcgagcggacggggcgatgccagacctgtgcaggaaacatgacggag
tgcccgggccattttggccacatcgagctggccaaacccgtgttccacgtgggcttcctg
gtgaagaccatgaaggtcctccgttgcgtctgcttcttctgctccaagctgctcgtggac
gcgaacaatccaaagatcaaggacatactgggcaaatcgaaggggcagcccaagaagcgc
ctgacccacgtttacgacctgtgcaaaggcaaaaacatctgcgagggcggtgaggagatg
gacaacaagtttggcgtggagcaacccgagggcgacgaggatctgaccaaggagaagggc
cacgggggctgcgggcgctaccagccccgcatccggcgcacgggtctggagctgtacgcc
gagtggaagcacgtcaacgaggactcgcaggagaagaagatcctgctgagccccgagcgg
gtgcacgagatcttcaagcgcatctcggacgaggagtgcttcgtgctgggcatggagccc
cgctacgcccggcccgagtggatgatcgtcaccgtgctgcccgtgcccccgctctccgtg
cggcccgccgtcgtcatgcagggctccgcccgcaatcaggacgatctgacccacaagctg
gcggacatcgtgaagatcaacaaccagctgcggcggaacgagcagaacggggcggccgcc
cacgtgatcgccgaggacgtcaagctgctgcagttccacgtggccaccatggtggacaac
gagctgcccggtctgccccgggccatgcagaagtccggccgacccctcaagtccctgaag
cagcggctgaagggcaaggaggggcgggtgcgaggaaacctgatgggcaagcgagtggac
ttctcggcccgcacggtcatcacgcccgaccccaacctgtccatcgatcaggtgggcgtg
ccccgctccatcgccgccaacatgaccttcgccgagatcgtcacgcccttcaacatcgac
aggctgcaggagctggtgcggcgggggaacagccagtacccgggggccaagtacatcatc
cgggacaacggggaccgcatcgacctgcgcttccaccccaagcccagcgacctccacctg
cagatcggctacaaggtggagaggcacatgtgcgatggcgacatcgtcatcttcaaccgg
cagccgacgctgcacaagatgtccatgatggggcatcgcgtccgcatcctgccctggtcc
acgttccgcctcaacctcagcgtgacgacgccgtacaacgcggatttcgacggggacgag
atgaacctgcatctgccccagtcgctggagacgcgggcggagatccaggagctggccatg
gtcccccgcatgatcgtcactccccagagcaaccggcccgtcatgggcatcgtgcaggac
acgctcaccgccgtgcgcaagttcaccaagagggatgtcttcctggagaggggcgaagtg
atgaacctgctgatgtttctgtcaacgtgggacgggaaggtgccccagccggccatcctg
aagccgcgcccgctatggacgggcaagcagatcttctccctcatcgtgcccggccacatc
aactgcatccgcactcacagcacccacccggatgacgaagacagcgggccctacaagcac
atctcgcccggggacaccaaggtggtggtggagaacggtgagctgatcatgggcatactg
tgtaagaagtccctgggcacctcggccgggtccctggtccacatctcgtacctggagatg
ggccacgacaccaccaggctcttctactccaacatccagaccgtcatcaacaactggctg
ctcatcgaaggccacaccataggcatcggagactccatcgccgatgccaagacctaccag
gacattcagaacaccatcaagaaagccaaacaggatgtcattgaggtgatcgagaaggcc
cacaacaacgagctggagccgaccccggggaacacgctgcggcagaccttcgagaaccaa
gtgaaccgcatcctcaacgacgcccgtgacaagaccggctcgtcggcgcagaagtccctg
tccgagtacaacaacttcaagtccatggtcgtctctggtgccaagggctccaagatcaac
atctcccaggttatcgcggtggtggggcagcagaacgtggagggcaagcggatccccttc
ggcttcaagcaccggacgctgccccacttcatcaaggacgactacgggcccgagagccgc
ggcttcgtggagaactcctacttggccgggctgacccccaccgagttcttcttccacgcc
atgggcgggcgcgaggggctcatcgacaccgccgtcaagacggccgagacaggatacatc
cagcggcggctgatcaagtccatggagtcggtcatggtgaagtacgacgccacggtgagg
aactccatcaaccaggtggtgcagctgcgctacggcgaggacgggctggccggcgagagc
gtcgagttccagaacctggccaccctcaagccctccaacaaggccttcgagaagaagttc
cgcttcgactacacgaacgagcgggcgctgcggcgtaccctccaggaggagctggtgaaa
gacgtgctgagcaacgcccacatccagaacgagctggagcgcgagttcgaacgcatgcgg
gaggaccgggaagtcctgcgggtcatcttccccaccggggacagcaaggtggtgctgccc
tgtaacctgctgcgcatgatctggaacgcgcagaagatcttccacatcaacccccggctc
ccctccgacctacaccccatcaaagtcgtggaaggcgtgaaggaactgagcaagaagctg
gtgatcgtgaacggcgaggacccgctgagccgacaggcgcaggagaacgccacgctgctc
ttcaacatccacctgcgctccacgctgtgctcccgccgcatggccgaggagttccgcctc
agcggggaggccttcgattggctgctcggggagattgagtccaagttcaaccaggccatc
gcgcacccgggggagatggtgggcgccctggccgcccagtcgctgggggagccggccacc
cagatgacgctgaatacgttccactacgccggcgtgtcggccaagaacgtcaccctgggc
gtgccccgcctcaaggaactcatcaacatctccaagaagcccaagacgccctcgctcacc
gtcttcctgctgggccagtcggcccgagacgccgagagagccaaggacatcctttgccgc
ctggagcacacgaccctgcggaaggtgacggccaacacggccatctactacgacccgaac
ccgcagagcaccgtggtggccgaggaccaggagtgggtcaacgtgtactacgagatgccc
gacttcgacgtggcccgcatctcgccatggctgttgcgcgtggagctggaccgcaagcac
atgaccgaccgcaagctgactatggagcagatcgccgagaagatcaacgccggcttcggg
gatgacctgaactgcatcttcaacgacgacaacgcggagaagctggtcctcaggatccgc
atcatgaacagcgacgagaacaagatgcaggaggaggaggaggtggtggacaagatggac
gatgacgtgttcctgcgctgcattgagtccaacatgctgacggacatgacgctgcagggc
atcgagcagatcagcaaggtgtacatgcacctgccccagacggacaacaagaaaaagatc
atcatcaccgaggatggggagttcaaggccctgcaggagtggatcctggagacagacggg
gtgagcctgatgcgggtgctgagcgagaaggacgtggaccccgtgcgtaccacttccaac
gacatcgtggagatattcacggtcctgggcatcgaggcggtgcgcaaggccctggagcgg
gagctgtaccacgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctg
ctgtgcgacaccatgacctgccgcggccacctcatggccatcacccgccacggcgtcaac
cggcaggacaccgggcccctcatgaagtgctctttcgaggagacggtggacgtcctgatg
gaggcggccgcccacggcgagagcgaccccatgaagggcgtgtcggagaacatcatgctg
ggccagctggccccggccggcaccggctgcttcgacctcctcctcgacgccgagaagtgc
aagtacggcatggagatccccaccaacatcccgggcttgggagccgcaggccccacgggg
atgttcttcgggtcggccccccagccccatgggggcctctcccgccatgacgccctggaa
ccagggggccacgccggcctacggagcctggtcccccagcgtcggcagcggcatgacccc
gggggccgccggcttctcgcccagcgccgcctccgacgccagcggcttcagccccggcta
ctctccggcctggtctccgaccccgggctccccgggctcccccggcccgtccagccccta
catcccctctccggggggggccatgtcgcccagctactcgccgacgtctccggcctacga
gccccgctcccccgggggctacactccgcagagcccctcctacagccccacctccccctc
ctacagccccacctccccttcttactcccccaccagccccaactacagccccacctcccc
cagctacagcccgacgtcacccagttactcccccacctctccgagctacagccccacctc
ccccagctacagcccgacctcccccagctacagcccgacctccccgagctacagcccgac
ctcgccgagctacagccccacctcgcccagttacagccccacctcgcccagttacagccc
gacctcccccagctacagccccacctcccccagctacagccccacctcccccagctacag
cccgacgtctccgagctacagcccgacgtccccgagctacagtcccacctcccccagcta
cagccccacctcccccaactacagccccaccagccccaactataccccgacgtcgcccag
ctacagcccgacgtcgcccagctacagcccgacgtcgcccaactacaccccgacgtcgcc
caactacagccccacctcccccagctacagccccacctcccccagctacagccccacctc
ccccagctacagcccgtccagcccccgctacacccccccagtccccgacctacacccccc
agctccccagctacagtcctacctcacccaagtacacccgccaccagtccctcctacagc
cccagttccccggagtacaccccgacctccctccaagtactcgccccaccagccccaagt
actcgcccaccagccccaagtactcgcccaccagccccacctactcgcccaccaccccca
agtactcacccaccagccccacctactcgcccacctccccggtctacacgcccaccagcc
cctaatactcgcccaccagccccacctactcgcccaccagccccaagtactcaacccacc
agccccagcgctactccaccgaccaggcccgaagggtccacctactcgccacctccccgg
ggtactcgcccaccagggccccacctacagccttcaccagcccggccatcagccccgacg
gacagcgacgaggacaactaa
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integrated database retrieval system
