Oreochromis aureus (blue tilapia): 116318759
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Entry
116318759 CDS
T07295
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116318759 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116318759 (polr1b)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116318759 (polr1b)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116318759 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
116318759
NCBI-ProteinID:
XP_031593746
Ensembl:
ENSOABG00000024520
LinkDB
All DBs
Position
LG13:complement(9444160..9451398)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSSKWSDLSKGPSLKNLTDGSFGHMKDTQHAAIQDLTKAHIESFDQAVIDGLNRVVQA
IPPLEFMFKNERISLGFVEAAIQNPVVAKGNICKEMKVFPAECRGRRCSYKGKIVADVSW
SINGVPKGIIKQSLGHVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKNRGQGYTQYGISMRCVREEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRIVTEENCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLNECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIVCQEVLTPGQLYLMFLKERLTAWLVSVKLSFDKRGSKVTGGWSSEMMIKML
NMGTDLTRSFEYLLATGNLQSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVALTLSTTSLPGLLCSLGVT
PVDGTPGRAFADCYPVVLDGAVVGWVEADLAPVVVESLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVQNLAFGKEELIGTFEQLYINVGILENEIEPRVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYGLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVKGEDGVVFGTKPGDPKVKEKLDADGLPFIGSVLQYGDPFYSYINLNTGQTFISYY
KSQEACIVDNIKVCSNDGGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLGHDATPFTFSEENSALDY
FGELLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLEVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaagtaagtggagtgatctttctaaaggtccgagtctgaaaaatttgaca
gatggaagctttggccacatgaaggacacccagcatgctgccattcaggatctgaccaaa
gctcacatcgagtcgtttgaccaggcggtcatagatggactcaaccgcgttgtgcaggcc
atcccccccttagagttcatgttcaaaaatgaacggatcagccttggtttcgttgaagct
gccatccaaaacccagtggttgccaaagggaacatctgcaaggaaatgaaggtgttccca
gcagagtgccggggaagaagatgctcgtacaaagggaaaatagtggcagacgtcagctgg
tcgatcaacggagttcccaaaggcatcatcaagcagtctctgggtcatgtgcccatcatg
gtgaagtccaagctgtgtaacctgcatggcatgtcccccaaagagctcgtagagcatcac
gaagaagccgaggaaatgggaggttatttcattgtgaatggaattgagaaggttatccgc
atgctgataatgccaaggaggaactatcctatcgccatgtcaagacccaagtggaagaac
aggggtcagggttacactcagtacggtatttctatgcgttgcgtgagggaggagcacaca
gccatcaacatgaacctgcattatctggaaaacgggactgtgatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgcgttaaaggctctggtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgcgaggacaattctttctacaagacc
tgtgtttctgagatgctgcgcatcgtcacggaggagaactgcaccacccgcagcaaggtg
ctcaattacctcggagagcgcttcagggttaagatgaacctccctgagtggtacacaaat
gaacagtgtgccaacttcttgttaaatgagtgtatctgcatccacctgaagtcagacgtg
gagaagttctacctgctctgtctgatgacgaggaagctcttcacttttgccaagcaggag
tgcatggaagaaaaccccgacagcatcgtgtgccaggaagtgctcactcctggtcagctc
tacctcatgtttctgaaggagagactgactgcatggttggtgtctgtgaagctgtccttt
gacaagagaggcagcaaagtgaccggaggatggagctctgaaatgatgataaagatgctc
aacatgggaactgacttgaccagatcatttgaatatctgctggccactggaaacctccag
tctaagacaggtctgggcatgctgcagaacaccgggctgtgcgttgtagctgacaagctg
aacttcattcgctacctgtctcacttccgctgcgtgcacagaggagcagcgttcgctaag
atgaggaccacctctgtgcgtaagctgctgcccgagtcctggggcttcctgtgtcctgtc
cacactccagacggcgagccttgtggactcatgaaccacatgacagccagctgtgaaatt
gtggcattgaccttgtccaccacgtcactgcctggtctgctctgttcgcttggtgtcact
ccagtggatggaactcctggccgggcctttgcagactgctaccctgtggtcctggacggt
gctgttgttggctgggtggaggctgacttggctccagttgtggttgaatcactgcgcagg
ttcaaggtgttaagagagaagaagattcctccctggacagagattgtcctggttcccaaa
acaggcaaggccagcttatatccaggcctgttcctcttcacaacaccttgtcgcatggtg
cggcctgtacagaacttggcttttggcaaggaagagttgattggcacctttgaacagctt
tacatcaatgtcggaatcttggagaatgagattgaaccaagagtaaccacacaccaggag
ctcttccctcacagtatgctcagtgtggtggcaaacttcatcccatactcggaccacaac
cagagtcccaggaacatgtaccagtgtcagatgggtaagcagactatgggcttcccacta
cactctttcatggatcgctctgataacaagctgtaccggctccagaccccacagagccca
ctagtcaggccttatatgtacgaccactacggcctcgacaactaccccagcggcaccaac
gccatcgtggccgtcatatcctacacaggctacgacatggaagatgccatgattgtgaac
aagtcgtcatgggagagaggctttgcccatggaagtatctacaagacggagctggtggac
ctggcagagaaggtgaagggagaagatggcgtggtgtttggaaccaagccaggtgacccc
aaagtgaaagaaaaactagacgctgatggactgcctttcatcggatcggtgcttcagtat
ggagaccctttctacagctacatcaacctcaacactggacagacctttatctcctactac
aagagtcaggaggcctgtattgttgacaacataaaggtctgcagtaatgacggcggctca
ggccgcttcaagcgtgtctgcattactgtacgagtgccccgaaatcccaccatcggtgac
aagtttgccagccgccacggacagaagggcatcctgagccgcctgtggccggcggaggac
atgcccttcacagaaagcgggatgactccggacatcttgttcaacccccacggcttcccc
tcccgtatgacaatcgggatgctcattgagagcatggccggcaagtcgggcgccctacac
ggcctcggccacgacgccacacccttcaccttttccgaggagaactcggcgctcgattac
ttcggcgagctgcttcgggcgggcggctacaactactacggtacggaaaggctgtacagc
ggactgagcggtcaggagctagaggcggacatcttcatcggcgtggtttactaccagcgg
ctacgtcacatggtctccgacaagtttcaagttaggacgacaggagcacgagacaaagtg
accaatcagcctgtaggaggaaggaacgtgcagggaggcatccgtttcggggagatggag
cgagacgccctgctggctcacggctcttcgttcttacttcacgatcgcctcttcaactgc
tcagaccgctcggtcgctcaggtgtgcgttgactgtggcagccttctctcccctctgttg
gagaaaccgccgccctactggtcatccatgcgccaccgtaagactgtctgcaccctgtgt
ggcaaaagtgactcggttgactcggtgtctgttccttatgtcttccgctactttgtagct
gagcttgctgcaatgaacatcaaagtcaaattagaagtcaagtga
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integrated database retrieval system
