Oreochromis aureus (blue tilapia): 116320857
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Entry
116320857 CDS
T07295
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116320857 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oau04090
]
116320857 (vcam1b)
04091 Lectins [BR:
oau04091
]
116320857 (vcam1b)
CD molecules [BR:
oau04090
]
Proteins
116320857 (vcam1b)
Lectins [BR:
oau04091
]
I-type lectins (Siglecs)
116320857 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C1-set
Ig_C17orf99
ICAM1_3_5_D2
Ig_5
ICAM_N
REJ
Motif
Other DBs
NCBI-GeneID:
116320857
NCBI-ProteinID:
XP_031596444
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All DBs
Position
LG17:24613285..24626999
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AA seq
816 aa
AA seq
DB search
MDLLCVRRLFVQLISAVLLMSSKHILALRVDITPETALFGLGERQQLVCLFQGCTTTPSV
SWSFLGDRPLSGSISTNQTCSVLTFEPVKMEHDGRIQCAVSCNGNEIKGSRKVQVYSFPS
DPVITGQDNVKLGVNSTLTCKAFNIYPDEEVNITWHSGNAILQTTVEDTESGAVQSVYNF
TAENMDQGRNITCRVTLKLKDLPDDKRTRESTVPINVLYAPVVKTLESKEVMAGSPLTLT
CLAEGNPEPTITWSFRTADGRTLQRGQGSQLNFTAVELSEAGRYECDARNTEGTNSSTVD
ITVHSPPTNTSLSVIPGEEVVEGQQVTFVCSSEGAPLPRLVLSRNGRELQSVDRASTMIF
DLPYALLEHSDVYQCVASNLYGSQQASSSITVRAHPLQVEASPQVSAARGSALSLSCKAS
GCLHTPILLTWSRKDQTVLQTTWPQDGLSVLHLQDLDLQDRGEYSCQAQCETVSRSRNIQ
VHVYSFPFDPVLENPGPVLLGEEAVFRCDVINVFWVNQLRIQWLLGNKMVAEKLFSFSSF
LQNVSFSLHHRVDEDHQVLTCSADLLQEGGELWRPKRTSIHLQVHYPPRNTSLLIRPGEE
LVEGRQVTFSCHSDGAPAPALVLSRNGMELQRIKPATSSPLTFTFSPILLEHSDLYRCEA
SNKYGSEVASHSITVKAPPRNTTVHILPSTVVQEGQNVTVCCQTISFPPSAVILKKMTNG
TELYSTNGTFLLVNLTAKDSGLYQVNVTNDLGYQVKIFSISVRERSTKLPPSFSVIIIPA
VCIATVLAASALFLDYVRRSRKKGFYQLPQSAPPSA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctgtgtgtccgcaggctctttgttcagctcatctcagctgtgctcctgatg
tcatcgaagcacattttggctctgcgggtggacataactcctgaaacagctctgtttggt
ctgggtgagcgtcagcagctggtctgcttgtttcagggctgtaccacaacaccaagtgtg
tcctggtcctttctgggggaccggcctctgagcgggtccatcagcaccaaccaaacttgt
tctgtgttgacctttgagcctgtaaagatggagcatgatggaaggatacagtgtgcagtc
agctgcaatggaaacgagataaaagggagccgcaaggtgcaggtttactccttcccatcg
gaccctgtcatcacaggccaggacaatgtcaaactgggggtaaattccactctgacctgc
aaggcatttaacatatatcctgatgaggaggtgaacatcacttggcacagtgggaacgct
atcctgcagaccacagtggaagataccgaatccggggcagtacagtctgtctacaacttc
acagctgaaaacatggatcagggaaggaatatcacctgtagggtcacactgaagctgaag
gacctgccagatgacaagaggaccagagaaagcacagtgccaataaatgtcttatatgct
cctgttgtgaagacgttggagtctaaggaagtgatggccggctctccgctcactctcacc
tgtttggcagagggaaatcctgagccgaccattacctggagtttcaggacagcagatggc
cgaactctgcaacgcggtcaaggcagtcagctcaacttcacagcagtggaactgtctgag
gctggtcggtacgagtgtgatgcgcgaaacacggaaggaacaaacagtagcaccgtggac
atcacggttcacagtccacccactaacacctccctctctgtaattccgggtgaggaggtg
gtggagggtcagcaggtgacttttgtctgtagctcagagggtgctccgctccccagactg
gtgctgagcaggaatgggagagaacttcaaagcgttgacagagcttccacaatgatcttc
gacctgccttacgccctgctcgaacactccgatgtctaccagtgtgttgcctctaatctg
tacggatcccagcaggcctccagctccatcactgtcagagctcaccctctacaggtcgag
gcgagtcctcaggtctctgcagcgagaggttcagctctgagtctgagctgcaaggcctcc
ggctgtctgcacacccccatcctcctcacctggtcgaggaaagaccagactgtcctccag
acaacctggccgcaggacggactctctgtgctccatctgcaggacctggatctccaggat
cggggtgaatatagctgccaggctcagtgcgagaccgtcagcaggagcagaaacattcaa
gtccatgtctattcgtttccatttgatcctgtactggagaatcctggccctgtcctgctg
ggtgaagaagcagtcttccgctgtgatgtcattaatgtcttctgggttaaccagctgagg
attcagtggcttttgggaaacaaaatggtggcggaaaagttgttcagtttctccagtttt
ttacagaacgtctcttttagtcttcatcaccgagttgacgaggatcatcaggtgctgacc
tgcagcgcagacctactgcaagaaggcggagaattgtggaggcccaagaggaccagcatc
catctgcaggtccactatcctccgaggaatacatcactgttaattaggccaggcgaggag
ctggtggagggtcgtcaggtgacctttagctgtcactcagatggagctccagccccagca
ctggtgctgagcagaaatgggatggagcttcaaagaatcaaaccagccacctcatcacca
ctgaccttcaccttctcccccatcctgctggaacactctgacctttaccggtgtgaagca
tccaacaagtatggatctgaagtggcttctcactccatcactgtcaaagctcccccgagg
aacaccacagtccacatcctgccgtcaacagtggtccaggaggggcaaaatgtcactgtc
tgctgccaaaccatcagtttcccaccgtcagctgtgattcttaagaaaatgaccaatggc
accgagctatattctaccaatggaactttcctactggtcaatctcacagccaaagactct
gggttataccaggtcaacgtgaccaatgaccttgggtaccaagtcaaaatcttcagcatc
agtgtcagagagagaagtaccaagcttccacccagtttcagcgtcatcatcatcccagcc
gtctgcatcgccactgtgctagcagcttctgctctgttcctcgactacgtgaggagatcc
aggaagaaaggcttttatcaactaccccagtctgctccaccttcagcctga
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integrated database retrieval system
