KEGG   Oreochromis aureus (blue tilapia): 116321309
Entry
116321309         CDS       T07295                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03008  Ribosome biogenesis in eukaryotes
oau03013  Nucleocytoplasmic transport
oau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116321309 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    116321309 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116321309 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116321309 (xpo1b)
   03009 Ribosome biogenesis [BR:oau03009]
    116321309 (xpo1b)
   03016 Transfer RNA biogenesis [BR:oau03016]
    116321309 (xpo1b)
   03036 Chromosome and associated proteins [BR:oau03036]
    116321309 (xpo1b)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     116321309 (xpo1b)
Ribosome biogenesis [BR:oau03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    116321309 (xpo1b)
  Pre-60S particles
    116321309 (xpo1b)
Transfer RNA biogenesis [BR:oau03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    116321309 (xpo1b)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116321309 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 BID Hydrolase_3 BspA_v Rap1a
Other DBs
NCBI-GeneID: 116321309
NCBI-ProteinID: XP_031596962
Ensembl: ENSOABG00000018592
LinkDB
Position
LG13:6564440..6589745
AA seq 1071 aa
MPAVMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITA
ALNPASPTNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcagttatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaatctgctggataatgtggtgaactgtctgtatcatggggtagga
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcacccagatgcctgg
acgagagtggacaccatccttgagttctcccagaacatgaacaccaaatactatgctctc
caaattctggaaacggttatcaaaaccagatggaagattcttcccaggaatcagtgtgaa
ggtataaaaaagtatgttgttgggctcattatcaagacttcatctgatgcatcaagtgta
gagaaagagaaggtgtacattggcaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacattgtgggggcgagtcgtaccagc
gagagcctctgtcaaaacaacatggtcattctgaagctgctcagtgaggaggtgtttgac
ttctctagtggccaaatgacccaggtcaaggccaagcacctaaaagacagcatgtgcaat
gaattctcccagatattccagctgtgtcagtttgttatggagaattcccagaatgccccc
ctggtccatgccaccctggagacacttctgcgttttctcaactggattcctctgggatac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaatgtgccgatgttt
cgcaacgtgacgttgaagtgcctgacagagattgcgggtgtgagcgtcagccagtacgag
gagcagtttgttaccctcttcaccttgaccatgtgtcagctcaaacagatgctgcctctg
aacaccaacattcggctggcctacgccaatgggaaagacgacgagcaaaacttcatccag
aacctcagtctgttcctgtgcacttttcttaaagagcacgggcaactcattgagaagagg
ctcaacctcagagagacattaatggaagccctccactacatgctgctggtgtcagaggtg
gaagagaccgagatcttcaaaatctgcctggagtattggaatcacttggccgctgagctc
tacagagagagtcccttttccacatccacgtcccctctgctttctggcaaccagcacttt
gacgtgcctccacggagacagctctatctacccgttctctccaaggtgcgtctgctgatg
gtaagtcggatggccaagccagaggaggtcctggtggtggagaatgatcagggggaggtg
gtcagggagttcatgaaggacacagattccatcaatctctacaagaatatgagggagact
cttgtgtacctgactcacttggattatgcggacacagaacgcataatgacagagaagctt
cacaaccaggtaaatggtactgaatggtcctggaagaacctcaacacactgtgctgggcc
attggatccatcagtggggctatgcatgaggaggatgagaagaggttcctcgttactgtc
attaaggatctgctgggtctctgtgagcagaagcgaggaaaagacaacaaggccatcatc
gcctctaacatcatgtacattgttggccagtaccctcgttttcttagagcccactggaag
ttcctgaaaactgttgtgaacaagctctttgagttcatgcacgagacccatgatggagtt
caggacatggcgtgcgacaccttcattaagattgcccagaagtgtcggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgatgagatcctcaacaacattaacacg
atcatctgtgaccttcagcctcagcaggtgcacacgttttatgaggcagtagggtacatg
atcggtgcacagaccgaccaggctgttcaggagcacctgatagagaaatatatgctgctg
cccaatcaagtgtgggacagcatcatccagcaggccaccaagaacgtggacatcttgaag
gacccagaaaccgtcaaacagctgggcagcattcttaagaccaacgtcagggcctgcaag
gcagtgggacacccctttgttatccagctgggaaggatttaccttgacatgctcaatgtg
tacaagtgcctcagcgagaacatctctgctgccattcagacaaacggtgagatggtgaca
aagcagccactgatccggagtatgagaacagtgaaacgggagactctgaagctgatctca
ggctgggtcagccgatcaaacgacccacagatggttggtgagaacttcgttccccccctg
ctggacgccgtcctcattgactaccaacgcaatgtccctgccgcccgtgagcctgaagtc
ctcagcaccatggcaactattgtcaacaagctgggggggcacatcaccagcgagataccg
cagatctttgatgccgtctttgagtgcactctaaacatgatcaacaagaactttgaggag
tatccagagcacaggacccacttcttctatctgctccaagcagtaaactctcactgcttc
cccgcattcctcgccatccctccagcccagttcaaactagtgctggactccatcatctgg
gcctttaagcacaccatgaggaatgtggctgacactggtctgcagattctgtacaccttg
ctgcagaatgtggcccaggaggaggcagccgctcaaagtttttaccagacgtatttctgc
gatatcctgcagcacattttctcagtggtcactgacacatcacacactgctggcctgaca
atgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaagatcactgca
gcgctgaaccccgccagccccaccaacaaccaggtgttcatccaggaatatgtggccaac
ctgcttaagactgccttcccccacctacaggatgctcaggtgaaggtgtttgtgacaggg
ctgttcagcttaaaccaggacattcctgccttcaaggagcatctgagggacttcctcgtc
cagataaaggagtttgcaggtgaggacacctcggatcttttcctggaggagagggaggca
tcactccgacaggcccaggaggagaaacacaagatccagatgtcggtgcccggcatcctg
aatcctcacgagatcccagaggagatgtgtgactga

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