Oreochromis aureus (blue tilapia): 116335072
Help
Entry
116335072 CDS
T07295
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116335072 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116335072 (tprb)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116335072 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
116335072
NCBI-ProteinID:
XP_031614541
Ensembl:
ENSOABG00000012413
LinkDB
All DBs
Position
LG17:complement(2380251..2405497)
Genome browser
AA seq
2357 aa
AA seq
DB search
MAALLQQELEASELTKLPKTVQSKLEKIVSDLRYEIDSLKAQHEQFRVDSEQQFFEKVKQ
LSQCQEEFLSHTQEHLKLKDEFNRLGEELQSVREKNREYESAQQRLSSEQTLLSKAKDEL
EAEKRELVRTLERRSLEVENLNDDLRQLNDKLVEVNSSKMTLQMKLDDLEAAEVNIKYKE
KRMEQEKELLHSQTAWFNEELKAKSEELLSLSRQKGNEILELKCSLESKEDEMKKLQDQV
TSLKTSNENLQKQNEDMISKLKEAKEQHTSMEEKFRNELNTNIKLCNLYKGAAADSEAKS
KELSQAVEELHKLLKDAGEANKALEDKLQEMNGVTDKTVGELKDRIQGLEKELDNANELL
SSSKLRGPVATTSILTEEQMTTMSPTAAAVSKIKPGMKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQNEADEAN
KRSSVLERDNQRFELQLADMAQQVRVLLIELEEARGNHVIHEEEVSSADVSSTSEVISQH
LVTFRSVEELQKQNQRLLAALRDLSEAQEMEEFEATSNKHGELEQSLEKAQAELESLREQ
RSQQIKMTESIVRQRDMYRVLLAQATGVNFPQQGTPTEDFSLTSTPRRSPAATPTAGTPT
ALVSMATESTEALEAKAALRQLQDIFSAYKKERAESEKVVTEQNEKLQEQLSELRSQNAK
ISTQLEFASKRYEMLQDNVEGYRKEIASLREKGQKMEAATQKLEQTVHTLNEDLKESKEK
LAMAEGRAENLRKERDMLKLVESRLNQEKETILSQQQSQNLLLTNLQAIQATLERSEVDT
RQRLNSQLEKQEREISQLQKRLEQEVEQRHLLTRNQEIQLMDAKRQLETQVALHQKTKEQ
LNAAESELNTLRMQQGSIEGRHILSSPSTPIGRGLPGSDQDREDLRGRLQLAETRVEELA
ESLRAATSSMEQYRAMAQSLEESLENEKQVTEQARSSIEGRMKEAEEQRCRLEEKLLQAE
KEKQDIEEQKKSVLAVLEEQINDLKRSLSSVQADHQAALQQVAVAEAQKQQAVKDCQDQV
KLAAEAQDKYEKEMMLHAADVEALQAAKAQALQAAELKHQLEEREQRISAELLEARVSWE
EQEKILKEEMSKMESRYEEMQRQNTLLHEQIQAMSSKMADNLQRAASESTLNISLTEEGK
SQDQLLEILRFVRREKEISESRYEVAQGETLRYRLRVEHLERELKEMQDSLSAARERMQV
TAKTLAQHDELMKKTETMSILLETNKSLREERDKMEQELQQTQAKVQKLESDILPLQQAN
SELSEKSGMLQAEKKLLEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRILQL
NEDNNRLKSEVVRTNNLTASLQNQIQSLRDSMSKITEEKNGLQKEMETKNLELQEKMRTI
AQIKKIGRRYRTQYDELKVAHDKLVAEAAAGPSQEEEARQASVQELQSLRDSLSQAEART
KELEGQLENINKVVTERENAQEQSSRLQTELTRLRQELQDKASQEDALRQQMAEKEEKTR
KAIVCAKQKINQLVGAKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERELRDLR
GQQERQEQRDEPAEAGPSKTQEPQRSTEQRQISLKTTPAADRGSASTSDPPTANIKPTPV
VATASKQPVNPGNKPTPRASIRPMITPAPVPTPTPTATVMPTTQVESQEAMQPAEGPPVE
HVTVYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSVTHTEPANQEPP
PVVIEATPSPQVERPSTSSSVFGTVSATPGTSAMSKRPREEEETASVVTDTEATQEDTSR
APISKKLRIIQRVGPEEEVLAEDSAEAEGVVPTDSLDGGEGSQTEEFSTLEEGDEGTASQ
SLTMEQEVTLSQSETTEQLQQEVIVIVTDTESDEEQEEEEEEEEEEQDYDDEDEEDEEEE
EEEDEDEEEDDREMGEEGEDSNGGSGDCNEPYEGDDTEGADVTEPGTETEESLGASDSTQ
RPADSQTPSFESGTMEAFSAEQPTSSGTRMPQSPRRPVHQLPPRLNIHPAPTSELGPPAQ
VQRIPVRRQSVGRLTPGVPGSAQHFFDEDDRMVPSTPTLVVPHRSDGFDQAIHSPQVAGV
PRFRFGPSEDMPQTSSSSHSDLGQLASQGGLGMYDSPLFLATHEEESGGRSVPTTPLQVA
APVTVFSEVPQSNTTEHASQSVPMVSTSTPGAAGAGEERDDVFLEPDTDRPGAEVSVDPV
VSQGDMEESSQASDKSSLPSTSQEPSSSSADTSSAPPKQSRPGPSRQLQRWPDSRGGRMK
RGGQAFPSWKQGRRFAR
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcctgcaacaggagttggaggcttccgaactaacgaagctaccaaaaaca
gttcaaagtaaactcgagaaaattgtttcggatctgcggtatgaaatcgattcattaaaa
gcccaacacgagcaattccgggttgacagcgagcaacagttcttcgaaaaagttaaacag
ctttcccaatgtcaagaagaatttctgtctcacactcaagaacatcttaaactcaaagat
gagtttaacagacttggagaggaactccaaagtgttcgcgagaagaaccgagaatacgaa
tctgcacaacagaggttgtcatcagagcagactttgctgtccaaagccaaagatgaactg
gaggcagaaaagcgagaacttgtgcgaacactggagaggagatccttagaagtggagaac
ttaaatgatgacctaaggcaactcaatgataagttggtggaagtgaactcgtcaaagatg
accctgcagatgaagttggatgatctcgaggcagctgaagtcaacatcaaatataaggag
aaacgaatggaacaagagaaagagctgctgcacagccaaacagcttggtttaacgaggag
ctgaaggccaagagtgaggaactgctgtccctgtcccggcagaagggtaacgagatcctg
gagctgaagtgttccctggagagtaaagaagatgagatgaaaaaactccaagatcaagtg
accagtctgaagacatcaaacgagaaccttcagaaacaaaacgaggacatgatcagcaaa
ctcaaagaagccaaggagcaacacaccagcatggaggagaagttccgaaatgagctcaat
accaacattaagctttgcaatttatacaagggagcagctgcagattctgaggccaaaagc
aaagagctgagtcaggcggtggaggagctgcacaagctgctgaaagatgccggtgaagcc
aataaggctcttgaggataagttgcaggaaatgaatggcgtcacagacaaaactgtcggc
gagttaaaggacaggattcagggccttgagaaggagctggacaatgccaatgaactgctg
tcaagttccaaacttagaggccctgttgctacaacatccattctgacagaagagcaaatg
acaacaatgtctccaacagccgctgctgtatccaagataaaacctggtatgaagctgact
gagttgtatacagcatacgtggagagccaggagcagctgcagttggagcggttggagaac
aagcgagtcaacaagtatctggatgacattgtgcaggaagtggaagcaaaagcccccatc
ctgaaaaggcagagggacgagcatgagcgcatgcagaagtcagtggccagcctttctgcc
aagctggagcaggctgttaaggaggttcaccgcctgcagaacgaggctgatgaggccaac
aagcgctcctcggtcctggaaagagacaatcagagatttgagcttcagctcgctgacatg
gctcagcaggttcgtgtgctgctgattgagctcgaagaagctcgtggaaaccacgtgatt
cacgaggaggaggtgagctctgctgatgtcagcagcacgtcagaggtgatcagccaacac
ttggtgactttccgtagtgtggaggagcttcagaagcagaaccagcgtcttcttgcggcc
ctcagagatctcagtgaagcccaggagatggaggagtttgaggctaccagcaataagcac
ggggagctggagcagagtttggagaaggcccaggctgagttggagtctttgagagagcaa
cgcagccagcagataaagatgaccgagtccattgtgaggcagagggacatgtaccgagtc
ttactggctcaggcgaccggagtcaacttcccacaacaaggtacaccaactgaagacttc
tccctgacgtctaccccacgtcgttcccccgcggccactcccaccgcaggaacgcccact
gctcttgtttccatggccacagagtctactgaggcgttggaggccaaggcggctctgcga
cagttgcaggacatcttctccgcctataagaaggagcgcgcggagagcgagaaggtagtg
accgaacagaacgagaaactccaagaacagctctctgagctccgctcccagaatgccaag
atatccacacagctagagtttgcctccaaaaggtatgagatgctgcaggacaatgttgag
ggctacaggaaagagattgcttcactgagagagaaaggacagaagatggaggctgccaca
caaaagcttgagcagaccgtccacacgttgaatgaggatctcaaagagtccaaggagaaa
ctcgccatggctgagggccgtgctgagaacttgcgtaaggagagagacatgctgaagctg
gtcgagtcccggctgaatcaggagaaagagacgattctgagccagcaacagagccaaaac
ctgctgctgaccaacctccaggctattcaggccactcttgagcgctctgaggttgacaca
cgtcagcgtctgaacagccagttagagaaacaggagcgagagatctcccagctacagaag
aggcttgaacaagaagtggagcagcgccacctgctcaccagaaaccaagaaatccaatta
atggatgcaaagaggcagttggagacacaagtcgccttacaccaaaaaacaaaggaacaa
cttaatgccgccgagtctgagctcaacaccctcaggatgcagcaaggcagcatcgaaggg
cgccacatcctgagctccccgtccacgccgatcggcagaggcctgcctggttcagatcaa
gacagagaggacctacgaggccgcctgcagcttgctgaaacgcgggttgaagagcttgca
gagagcctccgagcagccacatccagcatggagcagtacagagcgatggctcagagcctc
gaggaatcgctggagaacgagaaacaggtgacggagcaggcgcgttcatccattgaaggc
cgtatgaaggaggctgaggagcaacgctgcagactcgaagagaagcttctgcaagcggag
aaagaaaagcaagacatagaggagcagaagaagagtgtcctggctgttctggaggaacaa
ataaatgacctgaagagaagtcttagcagtgtccaggcagaccaccaggcagcgctacag
caggttgcagtcgctgaagcccaaaaacagcaagctgttaaggactgccaagatcaggtt
aaactggcagctgaagctcaagataaatatgagaaggagatgatgctgcacgcagcagac
gtggaagccctgcaggcagctaaagcccaggccctgcaggctgcagagctcaaacaccag
ctggaggagagagagcagaggatcagtgctgagttactggaggccagagtgtcatgggag
gagcaagagaagatcctcaaggaggagatgtccaagatggagagccgctatgaggagatg
caaaggcagaacaccctccttcatgagcagatccaggccatgagcagcaagatggcagat
aatttgcagcgtgctgccagtgagagtaccctcaacatatctttgactgaagagggaaaa
tcccaggaccagcttcttgagattctcaggtttgtacgtcgggagaaggagatctcagag
tctcgttatgaggtcgcccagggggagactttgcgttaccgtttgagggtggagcatttg
gaacgagagctaaaggagatgcaggacagtttgagcgctgctcgagagaggatgcaggtg
acagcgaagaccctggctcagcacgatgagctgatgaagaagacggaaacgatgagcatc
ctattggagacaaacaagagtctgagagaagagagggataagatggagcaggaactgcag
caaactcaagctaaggtgcaaaagctggagtcggacatcttgccactgcagcaggccaac
tccgagctgagtgagaagagcggcatgctgcaggcagagaagaagctgctggaagaggaa
atcaaacgctggaaggctcgtactcagcatttggtgagtcagcagaaagattcagatcca
gaagagtacaagcgtctgcattctgagaaagaggcacatctcaaacgtatcctgcagctg
aatgaggacaacaacagacttaaatcagaggtggtcaggacaaataatcttacagcttcc
ctacagaaccaaatacaaagcttgcgtgacagtatgagtaagataaccgaagaaaagaac
gggctgcagaaggagatggagaccaaaaaccttgaactccaggagaagatgcgaaccatc
gcacagatcaagaagatcggacggcgttacaggacgcagtacgatgagcttaaggtggcg
cacgacaagcttgtagctgaggccgcggcaggcccatcccaagaggaggaggctcgtcag
gcctcggttcaggagctgcagagcctcagagattctctgagtcaagctgaagctcgaact
aaagagctagaaggacagctggagaacatcaacaaggtggtcacggagcgggagaacgcc
caggaacagtcatctcggctgcagacggagctgaccaggctgcggcaggagctgcaggat
aaagcttctcaggaggacgcgctccgacagcagatggccgagaaggaggagaagaccagg
aaagccatcgtttgtgccaagcaaaagatcaaccagctcgtgggtgctaaagaccagttg
cagaaggaaaacgaggagctaaaacagcagcgtgaggagctggaggtgcgagtgagcgct
ctgaagtctcaatacgaggggcgtctgagtcggcaggagcgagaactccgagacctgcga
ggtcaacaggagagacaagagcagcgagatgagccagctgaggcaggtcccagcaagacc
caggagccgcagaggagcacagagcagaggcagatcagcctgaagaccactccagctgca
gacaggggcagtgccagcacctctgaccctccaaccgccaacattaagcctacacctgta
gttgctacagccagtaaacagcccgtcaacccagggaacaaacccactccaagagcaagc
atcaggcccatgatcaccccagctcctgtgcccactcctacacccactgctacggtcatg
cccaccacccaggtggagtcgcaggaagccatgcagccagctgaaggtccaccagtggag
cacgtgaccgtgtacggcagtgcgagcggctcggtgcgctctgccagccccaacgtccag
acaaccttagctagccccatgcttactgtgcagcagactcagacacaggccaccgcattc
gttcaaccaacgcagcagcagagcgtgacccatacagagccagccaatcaggagccaccg
cctgtggtgatcgaggccacgcctagcccgcaggtggagcggccgtcaacgtcgtcctct
gtgtttggcaccgtgtcagcaacaccgggaacatcagccatgtccaagcgtcctcgggaa
gaggaggagaccgccagtgtggtcactgacacggaagcgactcaggaggacacctcccgg
gctcccatatcaaagaagctgcgcattatccagagagtgggtccagaggaagaagtgctg
gccgaggacagcgctgaggccgagggagtggtgccgacagacagtctagacggtggagaa
ggaagccagaccgaagagttttccacgctggaggaaggagatgaaggcacagcctctcag
tcccttacaatggagcaagaggttaccctgagccaaagcgagaccacagagcaactccag
caggaagtgatcgttatcgtaacggacacagagagtgacgaagaacaagaagaggaggag
gaggaggaagaagaagagcaggactacgatgatgaggacgaagaagatgaagaggaggag
gaggaggaagatgaggacgaggaggaagatgacagagagatgggagaggaaggagaggac
agcaacgggggcagcggagattgcaacgagccctacgaaggagacgacacggagggagct
gacgtaacagagccgggcaccgagacagaggagagtctgggggcgtccgactccacccaa
aggccggcggattcccagacacccagctttgagagtggcacaatggaggctttctctgca
gaacaacccacaagttctggtacacgcatgccccagtcgccacggagaccagtgcatcag
ctgcccccacgcctgaacatccaccccgcaccgacatcagaactggggccacctgctcag
gttcagcgtatcccagtgcgacgccagtcagtgggcagacttactcccggtgtgccgggc
agtgctcagcactttttcgatgaggatgacaggatggttcccagcactcccactctggtg
gtgcctcaccgctctgatggttttgatcaggccatccactcgccacaggtagctggcgtg
ccgcgcttcaggtttggcccttcagaggacatgccgcagaccagctcttcctcacactct
gatctgggtcagcttgcatcacaaggaggtcttgggatgtatgacagtcccctgttttta
gccactcacgaggaggagtctggtggacgcagcgttcccaccacaccgctacaagttgcg
gcaccagtaaccgttttctcagaagtgcctcagtccaacacaacagagcacgcctctcag
tctgttcccatggtgagcacatcaacaccaggagctgccggtgcaggggaggagagggac
gacgtcttcctggagccagacactgataggcccggtgctgaagtgtcggtggaccccgtg
gtgtctcagggcgatatggaggagtcgagccaagcgtccgacaagagcagcctcccctcc
accagccaggagccttcctccagctctgcagatacaagcagcgctccaccaaaacagtct
cggcccgggcccagcagacagctccaacgatggccggacagccgcggcggccgcatgaag
agaggaggtcaagcttttccttcatggaaacaagggagaagattcgccagatga
DBGET
integrated database retrieval system
