KEGG   Octopus bimaculoides (California two-spot octopus): 106878968
Entry
106878968         CDS       T04127                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020  RNA polymerase
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106878968
  09124 Replication and repair
   03420 Nucleotide excision repair
    106878968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106878968
   03400 DNA repair and recombination proteins [BR:obi03400]
    106878968
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106878968
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106878968
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DUF5886 DUF3716 Lar_restr_allev DZR
Other DBs
NCBI-GeneID: 106878968
NCBI-ProteinID: XP_014783831
EnsemblRapid: LOC106878968
UniProt: A0A0L8G6A6
LinkDB
Position
5:64298032..64298898
AA seq 130 aa
MADKDFFEPTDSGPGFVGIKFCKECNNMLYPKEDKANKILLYACRNCQYQEIADNTCIYV
NRITAEVDEFTQIIGDVIADPTLPRTEDHPCPRCGHRQAVFFQSHSSKAEEGMKLYYVCT
NQQCIHQWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atggctgataaagacttttttgaacctactgattctggtccaggttttgttggtatcaag
ttttgtaaagaatgcaacaatatgttgtatcctaaagaagacaaagctaacaaaattctt
ttgtatgcatgtcgtaattgtcaatatcaagaaattgcagacaacacgtgtatttatgtg
aacagaatcactgctgaagtggatgaatttacacagattattggtgatgtaatagctgat
ccaacattgccgagaacagaagatcatccttgtccaagatgcggccatagacaagctgta
tttttccagtctcatagttccaaggccgaggaaggcatgaaattatattatgtttgtact
aatcaacagtgtattcatcaatggactgagtaa

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