Octopus bimaculoides (California two-spot octopus): 106879197
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Entry
106879197 CDS
T04127
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106879197
Enzymes [BR:
obi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106879197
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106879197
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
106879197
NCBI-ProteinID:
XP_014784145
EnsemblRapid:
LOC106879197
LinkDB
All DBs
Position
8:complement(13729340..13759660)
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AA seq
554 aa
AA seq
DB search
MSPAKWESDIADIEDIVNAQEPVTNRNNVARRMVMPRVRKRKKVVEAAPIQADSVIPGTQ
NIYLKTWGCSHNNSDGEYMAGQLANYGYTITDSKEKADLWILNSCTVKSPAEDHFRNEIN
KAKSLGKHLVVAGCVPQGQPKSEYLSGISVLGVQQIDRVVEVVEETLKGHTVRLFGQKKQ
AGKKTGGASLALPKIRKNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPDDIVQRAVQ
SFEEGVVEIWLTSEDLGAYGHDIGVTLPELLWKLVDVIPEGCMLRLGMTNPPYILEHLEE
MAKICNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRHVVDFLKEKVPGITIATDIIC
GFPTETNEDFNESLALVKEYQFPSLFINQFFPRPGTPAAKMTRVDPQEVKKRTKAMSELF
QSYYPYSHKVGEKHTVLVTEISFDQNFYVGHNKYYEQVLVAKDGDFMGKSIDVEITSTGK
HFLKCHVLGPENIHKLNVPPPKAKGEVSGAKPVLMPLQTSKMLPIYTEKVLLTLAVVFLI
TASFIKAWQWYAIQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgcaaagtgggaatctgacatcgctgacattgaagacatcgttaatgcacaa
gaacctgtaactaataggaacaatgtcgctcgaagaatggtaatgcctcgagttcgcaag
cggaaaaaggttgtggaagctgctccaatacaagctgatagtgtgataccaggaacccag
aatatttatttgaagacttggggctgttcacataacaattctgatggagaatacatggct
gggcaacttgcaaactatggttatactataactgattctaaggagaaggcagatttgtgg
atactaaacagctgtacagtaaaaagtcctgctgaagatcatttccgtaatgaaattaat
aaagctaaatctttaggaaaacatcttgtggtagctggatgtgtgccacagggacaaccc
aaatcagaatatctttctggaataagtgtattgggtgtacaacaaatcgatcgtgtggtt
gaagttgttgaagaaactctaaaaggtcatacggtacgattgtttggtcaaaaaaagcaa
gctggtaaaaaaactggaggtgcttcactggcgttaccaaaaattagaaagaatcctttg
atagaaataattgctatcaacactggttgtctcaaccaatgcacctactgtaaaaccaag
catgctcgtggagaattaggtagttacccgccagacgacatagtgcaacgagccgtgcaa
tcttttgaagagggtgttgtggagatatggcttacttctgaagatcttggtgcttatggc
catgatattggtgtaacgcttccagaacttctctggaagcttgttgatgtaatacctgaa
ggttgtatgttgcggttaggaatgactaacccaccttacattttggaacatttagaggaa
atggctaagatttgtaaccacccacgagtttatgcctttttacacgttcctgtgcagtca
gcctctgacagtgttctcatggacatgaaacgagaatattgtattgatgacttcagacat
gttgtagattttctaaaagaaaaagttcctggtattaccattgctacagacattatatgt
ggcttcccaacagagacaaatgaggatttcaatgaatctttggcacttgttaaggaatac
cagttcccaagcttgttcataaaccaatttttccctcgtcccggtactcctgctgctaaa
atgaccagagttgatcctcaagaggtaaagaaacgaactaaagcaatgtctgagctattt
caatcgtattacccttatagtcacaaggttggtgaaaaacatactgtacttgtgacagaa
atatcattcgaccagaatttttatgttggacataataagtattacgagcaggtattagta
gcaaaagatggagattttatgggtaaatctattgatgtcgaaataacttcaacaggaaaa
cattttctgaaatgtcatgtccttggtccagaaaacattcataaattaaatgtccctcct
cctaaagcaaaaggtgaagtttccggagctaaacctgtactaatgcctctacaaacatct
aagatgcttcctatctatacagagaaagtacttttgactctagctgtcgtctttctaatc
actgcttcctttatcaaagcatggcagtggtatgctatccaataa
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