Ooceraea biroi (clonal raider ant): 105277357
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Entry
105277357 CDS
T05778
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obo03016
]
105277357
Enzymes [BR:
obo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
105277357
Transfer RNA biogenesis [BR:
obo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
105277357
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-GeneID:
105277357
NCBI-ProteinID:
XP_011333947
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All DBs
Position
9:13115199..13117880
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AA seq
541 aa
AA seq
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MVVPCADIIEDIEDLIASQDITPKERYSSRKRVTIRPKRQQQLQEDVPQPRDLSSVIPGT
QTIYVKTWGCTHNSSDTEYMAGQLAAYGYNLTDDKLKAGLWLLNSCTVKSPAEDQFKNEI
NHGKKMGKHIVVAGCVPQGAPKSSFLQGLSIIGVQQIDRVVEVVEETLKGNTVRFLHQKK
DAGKKVGGASLSLPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPAEIVERAR
QAFDEGICELWLTSEDTGAYGRDIGTSLPELLWQLVNVIPEGCMMRVGMTNPPYILEHLD
EMAKILRHPRVYGFLHVPVQSGSDQVLADMKREYTRAEFEHVVNFLSERVPGLTIATDII
CGFPTETEADFEETMTLCQKYRFPSLFINQFFPRPGTPAARMPKVPAQQVKARTKRLSEF
FQSYEPYGHKVGLVQKVLVTEISHDKRHYVGHNKFYEQVLVPMREKYMGKMIDVRITEAT
KFSMKGEPISEGVSPALKSPLPLGIVSGMPVQTKPTSKYTLATFMAIFFAVIFRILWKFF
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgccgtgtgcggacattatcgaagatatcgaggatctgatcgcgtcgcaagac
ataacgcccaaggagagatacagctcgaggaagcgcgttacgatacgaccgaaacgacag
cagcagctgcaggaagacgtgccacaaccgcgtgacttatcgagcgtgatacccggcacg
cagacgatctatgtaaagacatggggatgtacgcataacagttcggacaccgagtatatg
gctggtcagttggcggcatatggttacaatttgacggatgacaagctcaaggcgggcctg
tggctcctaaattcgtgtaccgtgaagagtcctgcggaggatcagttcaagaatgagatt
aatcatggcaaaaaaatgggcaaacacatcgtggtcgctggatgtgtgccacaaggtgct
ccaaagtcctccttcctgcagggattgagcataatcggcgtgcaacagatcgaccgagtg
gtcgaagtcgtggaggaaactttgaaaggtaacacggtgaggtttctgcatcaaaagaag
gacgctggcaagaaggtgggcggtgcctctctgagcttaccaaaggtgcggcgaaatccg
ctgatcgaaatcatagcaataaacacgggctgcttgaatcagtgcacctactgcaagacg
aagcacgcgcgcggagaactgggcagttatccaccagcagagatagtggagcgagctagg
caggcgtttgacgagggcatatgcgagttatggttgacgtcagaggacaccggtgcttac
ggtcgcgacatcggtaccagcttaccggaattgttgtggcaactggtgaacgtgatcccc
gagggctgcatgatgcgcgttggtatgaccaacccaccatacattctggagcacttggac
gagatggctaagatcctacgacatccacgagtctatggtttcctgcacgtcccagtgcag
tcgggcagcgatcaagtgttggccgatatgaagcgcgagtacacgcgcgccgaattcgag
cacgtggtgaatttcctaagtgagcgggtaccgggtttgaccatagccacggacatcatc
tgcggttttcccacggagaccgaggcggacttcgaggaaacgatgacgctctgccagaag
tacaggtttccgagtctgtttatcaatcagttctttcctcgaccaggtacacccgccgct
aggatgccgaaggtgcctgcgcagcaggtgaaggcgagaacgaaacgactatccgagttc
ttccagtcgtacgagccttatggtcacaaagtgggactggtgcagaaagtgctggtgacg
gaaatatcgcacgataaacgacattacgtaggtcacaataaattttatgaacaagtgctg
gtccccatgagggagaagtacatgggaaagatgattgacgtgaggatcacggaagcaacg
aagttttccatgaagggagaaccgattagcgaaggcgtgtcaccagcactgaagtctcct
ctaccattgggaatcgtttctggaatgccagtacagacaaaaccgacgtcgaaatacacg
ctagcgacgtttatggcgatattctttgctgtgatatttaggatactatggaaatttttt
atttaa
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