KEGG   Ooceraea biroi (clonal raider ant): 105284456
Entry
105284456         CDS       T05778                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03020  RNA polymerase
obo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105284456
  09124 Replication and repair
   03420 Nucleotide excision repair
    105284456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obo03021]
    105284456
   03400 DNA repair and recombination proteins [BR:obo03400]
    105284456
Transcription machinery [BR:obo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105284456
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105284456
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD DZR Zn_ribbon_recom Ogr_Delta DUF4892 CpXC
Other DBs
NCBI-GeneID: 105284456
NCBI-ProteinID: XP_026828679
LinkDB
Position
10:907842..910593
AA seq 130 aa
MSKITGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCSHREAVFFQAQTRRAEEEMRLYYVCT
NQHCCHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcaaagataacgggctatgatacacatgacgacggcccgggattcgtgggcatcaga
ttttgccaggaatgtaataacatgttgtatccaaaagaggataaggagaacaaagtgctg
atgtacgcatgcaggaattgcgatttcaagcaactggcagacagcaactgtatctatgtg
aacaagatcatgcacgagatagatgaactgacgcacatcgttgccgacgtgatatcggac
cctacgctgccgagaaccgaggaacacccatgcccaaagtgcagtcacagagaagctgtg
tttttccaggcgcaaactaggcgagctgaggaagaaatgagactgtattacgtgtgcacg
aatcaacattgctgccacagatggacggagtga

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