Oryza brachyantha (malo sina): 102701798
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Entry
102701798 CDS
T02995
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102701798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102701798
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102701798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
102701798
NCBI-ProteinID:
XP_006649036
LinkDB
All DBs
Position
2:complement(23433506..23458988)
Genome browser
AA seq
2043 aa
AA seq
DB search
MPLFISEEELRLLGGDVAAVAERADAAIRELRQQVDTVRAESDAAAIAAEQTCALLEQRY
ATLSAEADRYQAEIAELNAASERRAADLASSQSEIHQLRIQAIAKDGEIERLKVEISELH
KSKSQSLELIGQRDAEMREKDGIIQNYHDKIVNLADSSASKGARIQEVEAKLTHLQATCN
RITQEKELLEKHNLWLDEELKEKIKNLAEIRKSNMDEEARMSAKVAELEREISESSSSLR
RSKERVSELEQRVSYMEKELCSTKDAAAANEQRLATELSTVMKLVELHKESSEEWSKKSG
ELEGVIKALETHLAQVEDEYKEQLEKETSAKRDLEKEATYLKQKLEKCESDLENTRKSRE
LSFTSLVAPDPCDLAGLPMKDISLSDAANQNDLMIVPKVPTGVSGTALAASLLRDGWSLA
KIYEKYQEATDALRHERFGRRHAEAVLERVLHEIEEKAELILDERAEHRRMVEAYALMDQ
KLQQALLEHDNFENTIRNLKSELKRRERDHSIAQKEIDDLQKQIAVLLKECQDIQLRCGS
SLPNVGYSALSTNTSTGVPVVGNNIHEHMTFNDINELVQQNVQLRNQVHLLSADLDKRDM
ELRESFQIELKKITDDAASRVEKVMKKSEEQAIMIESLHRSVAMYRKLCEEQQKSRANVE
HISNNLQDDGRNDLMVLFEGSQEVSRKAYEQVSERAKILDEELTKLRTELLSLRSERDKA
VLEAEFARDRLNGFTAELEHQRKEANSISLRNAELMHLVVDYEKRLRENSESVKAVEENS
RKLSMEMSILKNEKEILAKSEKRALDEVHELTTRVHRLQATIDTIHATEEVQENARSVER
RNQEEYIKRLERDWAEVKKELQEQRDHVRVLTLDKKNAFDECLKQVEDMRKELQNSWKAA
TDAELRAAVAEAKCSDLEAKLKSRKTIFRDGGRDILSSTEENDELFQLKEELEKYKEEAQ
ANKNYMLQYKEIANSNESALKQMESALQDYKTESENIKKSLEDEITKMRSKLSELEKCYA
MKCEEAASAIEAKEKDTTSLMNEISLMRNEVSEKVLQIERLEIELASSKSALDEQYKRWR
SAQNNYERQVILQSETIQELTNTSKQLSSLQQEITVLRQTVEAQKAENDALRTLGEQEKI
ELVKGKDEALQKYNELNDQNKILHNRLEALHIRLAEKERDIASISSQRIDSHGEDDLHSV
IGYLRRSKEIAETEISLLKQEKSRLQIELESALKSTKEAQDLLRSQSDSARTSMLKDEEF
KSLQFQVRELNLLRESNIQLREENRHNFEECQKFRDEAQKAKIEAERLHNLLLEKQVDAE
ICKKEIEMQKIEIANLNQKISELVENSKGVDLNTYETMKDELQKIKSSLRENSAELERTK
NFLSEKDSVIRNLEEKLAGCQSDLDAREKKLNDVEASLKSEIERQRKVNFTIKRRLDASV
KEKEELVKEKQSLSKQMEDMKSSQKTTSENANEQAIKEKDFRIQTLEKILEKERDDNKKE
KVMRRRSEKVFATAIQNMNQERKQVEESIEKHRQAVKEVIENYSGVSSQIPSGSAIDELL
RSYFLAIKTVEESSPFQDGATSQATSVETSIVDASAATAGRPVATPPRPAQVKVMEERAV
STLPKPSTEVRRPGGRRPLIRPSLERVEEPQADIDATVLESSTEKGGLLMERETSGGMSA
LQPSRKRLVPSAQVRDDASQGESTDANPPLKKPKEGSSHGTTELKTEQSPLEDVVTAQVP
VLPSTEDQDEQQPGEEMDTDQASLPIEEAEETREDDLGDKDDMEPHIDAPMDIQGQDAET
GIDNDTTVVEDVPVKSEAVMESSFEEDLKAEDSKEEGQFTAAADVEDEREEGELPEEPEQ
PDSITPVLDGGEQAGDSFRAASPAGQTEMSDVDTPEETGEVDATVEPDQSPLRQSGVADA
SPSQTTDVSPAREPSPNTLQASAPSEQQNPTPSPVHAGAPSEQQNPTLNAGASSEQQNPT
TAAEGVETRTRTINLTERARQNRQARILRSTTQQTARGRGQQSLTYRKDGGRGSRGRGGR
GQS
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcatatccgaggaggagctgcggctcctgggcggcgacgtggccgccgtc
gccgaacgggctgacgccgccatccgcgagctccggcagcaggtggacaccgtccgtgcc
gagtccgacgcggcggccatcgcggccgagcagacctgtgccctcctagagcagcgttac
gccactctctctgccgaggccgatcgctaccaggccgagatagccgagctcaatgccgcc
tccgagcgtcgagccgccgatctcgcctcctcgcagtccgagatacaccagctccgcatc
caagccattgcgaaggatggcgagattgaacggctgaaagtagaaatctcagagctgcac
aagtccaagagtcagtcactggaactaattggtcagagggatgcagagatgagggagaag
gatggcatcatccagaactaccacgataagatagtaaatctggcagactcttctgcaagt
aaaggggctaggatacaagaggttgaagctaagttaactcatttgcaggccacatgtaac
cgaatcacacaggagaaagaactgcttgaaaagcataatctctggcttgacgaggaactt
aaagaaaaaattaagaacttagctgaaataaggaaatcaaatatggatgaggaggctagg
atgtcagcaaaggttgcagagcttgaaagagagatttctgaatcatccagttccttgagg
agaagcaaagaacgggtttccgaacttgagcaaagggtatcctatatggaaaaggagttg
tgctcaacaaaggatgctgcagctgctaatgaacaacgccttgctactgagctttcaact
gtcatgaaacttgttgaacttcacaaagaaagttctgaggaatggtcaaaaaaatctggg
gagcttgaaggagttattaaagcattggagacacatttggcccaggttgaagatgaatac
aaggagcagcttgagaaggagacttcagccaagagagaccttgaaaaagaagctacgtat
ttgaagcaaaagcttgaaaagtgtgaatctgatctggagaatacaaggaaatctcgtgaa
ttgagcttcacttcattggttgcaccagacccttgtgatctagcaggcttaccgatgaaa
gacatatcattgtctgatgcagcaaatcagaatgacctaatgatagtaccaaaagtacct
accggtgtttctggaactgcattagctgcttcccttcttcgtgacggttggagtcttgct
aagatctacgagaaataccaagaagctactgatgctttacgtcatgagaggtttgggcga
agacatgcagaagcagttcttgagagggttttgcatgaaattgaagagaaggctgagctt
atcttggatgaacgagctgagcataggaggatggttgaagcatacgctctaatggatcag
aaattgcagcaagcactgctggagcatgataattttgaaaataccattaggaacctgaag
tcagagttaaaaaggcgggaacgtgatcatagtattgcccagaaagaaatagatgatctg
caaaaacaaatagctgttcttttaaaggaatgccaagatatacaacttcgttgtggttct
agccttccgaatgtaggttacagtgctctttctacgaacacaagcactggagtgcctgtc
gttggaaacaacattcatgagcatatgacattcaatgatatcaatgagttagttcagcaa
aatgttcaacttcggaatcaagttcacttgctctctgctgatcttgacaaaagggacatg
gaactccgggagagcttccaaattgagttgaagaaaattacagatgatgctgcatccagg
gttgaaaaagtgatgaaaaaatctgaagaacaagcaataatgattgaatctcttcacaga
tctgtagcgatgtatcggaagctttgcgaagaacaacagaagtctcgtgccaatgttgaa
cacatatccaataatttgcaagatgatggcagaaatgacctgatggttctatttgaagga
tcacaggaggtttcaaggaaagcttatgagcaagtgtcagagcgcgccaaaatccttgac
gaagagctgacaaagttgaggactgagcttttgtctttgcggtctgagcgtgataaggca
gttcttgaagcagaatttgctcgagaccggcttaatggatttacagcagagcttgagcac
cagaggaaggaagctaattctatttcgctaagaaatgcggaattgatgcatttagtagtt
gattatgaaaaaagactgcgtgaaaattcagaatctgtgaaagctgtagaggagaactca
aggaagctatcaatggagatgtctattctaaagaatgaaaaagaaatattggcaaagtca
gagaaaagagctttggatgaagttcatgagttaaccacaagggtgcatcgcctgcaggca
acaattgacacaatacatgccactgaggaggttcaagagaacgcaaggtctgtcgaaagg
agaaatcaagaggaatacatcaagagactggaaagggactgggcggaagtgaaaaaagag
ctccaagagcaaagggatcatgtccgtgtcctgacacttgataagaaaaatgcttttgac
gaatgtctgaagcaggtagaggatatgaggaaagagttacagaattcatggaaagctgct
accgatgctgaattgagggctgctgttgcagaggcgaagtgttctgatttggaggcaaaa
ctaaaatcaagaaagaccatttttagggatggtggacgtgatatcctatcatccaccgag
gagaatgatgagcttttccagctgaaagaggagttggaaaaatataaagaggaagctcaa
gcaaataaaaactatatgcttcagtacaaagaaattgcaaactcaaatgaatctgcattg
aagcaaatggagtctgcccttcaggattacaaaactgagtctgagaatatcaagaaaagc
ttggaagatgagattacaaagatgaggagcaagttgtctgaactggagaagtgttatgca
atgaaatgtgaagaagctgccagtgcaatcgaagctaaagagaaggacaccacttcgctc
atgaatgaaatctcattgatgagaaatgaagtttctgagaaagtattacagatcgaaaga
ttagaaattgagttggcttcctcaaagagtgctttagatgagcagtataagcgttggcgt
agtgctcagaacaattatgagcgccaggttatcctgcaatctgaaacaatacaggagctg
actaatacttccaagcagctatcttctttgcagcaggaaatcacagtgcttcgtcaaaca
gtagaagcacagaaggctgaaaatgatgctctaagaacccttggagagcaagaaaagata
gagcttgtgaaaggaaaggatgaggccttgcagaaatataatgagctaaatgatcagaat
aaaattctgcacaaccgactagaagctttgcacattaggttggctgagaaagaacgagat
attgccagcatttcatcgcaacgcattgattcacatggtgaagatgatttgcatagcgtc
atcggctacctgcgcagatctaaagaaatagcagaaacagagatatctttgcttaaacag
gagaagtcacggcttcagatagaattggaaagtgcattgaaatccacaaaggaggcacag
gacttgctccgcagtcaatctgatagtgcaagaacatcaatgctcaaggatgaagaattt
aagtcactgcaattccaggttagagagcttaatttgcttcgtgaaagcaatatacagctt
agagaggagaacaggcacaattttgaagaatgccagaaattccgcgatgaggctcaaaag
gctaaaattgaagctgaaaggttgcataatcttttactagaaaagcaggtggatgctgaa
atatgtaaaaaagaaatagaaatgcagaagatcgaaatagcgaatctgaatcaaaagatt
tctgagttggttgaaaatagtaaaggcgttgatttgaacacgtacgagaccatgaaggat
gaacttcaaaagataaaatcatccttgagagagaattcagcagagctagagcgcacgaaa
aattttctttctgagaaggattctgtaataagaaatttggaggaaaagcttgctggatgt
cagtctgatttggatgctagggaaaagaagctgaatgatgttgaggccagccttaaatct
gaaattgaaaggcagaggaaggtaaatttcaccatcaagaggaggcttgatgcatcagtg
aaagagaaggaggagctggtcaaagaaaaacaaagcctttcaaagcaaatggaagatatg
aaatcaagtcagaaaactacatccgaaaatgcaaatgaacaggccatcaaagaaaaggac
ttcaggatacagacattggaaaaaatcttggagaaagagagagatgataataagaaagaa
aaggtaatgcgcagaaggagtgagaaggtatttgctaccgccattcaaaatatgaatcag
gagaggaaacaagtagaggaatcaatagagaagcataggcaggctgtgaaggaggtcatt
gagaactattctggagtatcctctcaaatcccatctggatctgcaatcgatgagctgtta
cgttcatattttctcgctattaaaactgtcgaagagtctagtcccttccaagatggtgca
acaagtcaggcaacatctgttgagacttccattgtggatgcatctgcagctactgcaggt
aggccagtagccactccaccaaggcctgctcaagttaaagttatggaggagagagcagtt
tctactttgcccaaaccaagcactgaagtacgcagaccaggaggaaggagaccgcttatt
cggccttcacttgaacgggttgaagaaccccaagctgatattgatgcaacagtacttgaa
agttccacagagaaaggtggcttgttgatggaacgtgaaacttctggtggcatgtctgca
ctacagccaagtcgtaaacgactagttccatctgcacaagtgagagatgatgcctcacaa
ggagagagtactgatgccaatccaccactgaagaaacccaaagaaggatcttcacatggt
actactgagctaaaaactgaacaatcgcctctcgaagatgttgtcacggcacaggttcct
gtgcttccatctacagaagaccaagatgagcaacagcctggagaagagatggacactgat
caagcttccttgccaattgaagaggctgaggaaacaagggaagatgatttgggtgataag
gatgacatggagccgcatatagatgcaccaatggacatccaaggacaggatgccgaaact
ggtattgacaatgatacaactgttgtggaagatgtgccagtcaagtcagaagcagttatg
gaatcatcattcgaggaagatctgaaagctgaggattccaaggaagagggtcagtttact
gcagccgctgatgttgaagatgagagggaggaaggggagttgccagaggaaccagaacag
ccagacagcattaccccggtgctggatggtggtgagcaagccggtgattcattcagggcg
gcctctccagcaggacaaactgaaatgagtgatgttgatacgccagaagagactggagag
gttgatgctactgtggaaccagatcaaagccctcttagacaatcaggtgtggccgatgcc
tcaccaagccaaacgacagatgtatcccctgcacgtgaaccttctcctaacacactccag
gctagtgcaccttctgaacagcagaatcccaccccgagcccagttcacgcaggtgcacct
tctgaacaacagaatcccacccttaacgcaggtgcatcttcggaacagcagaatcccacc
actgcagcagagggtgttgaaactcgtaccagaacaatcaaccttactgagagagctagg
caaaatcggcaagccagaattcttcgctcaacaactcagcagactgcaaggggccgtggc
caacagtcccttacctacaggaaagatggcggtcgaggatcacggggtcgtggtggacgt
ggtcagtcgtaa
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integrated database retrieval system