KEGG   Oryza brachyantha (malo sina): 102702932
Entry
102702932         CDS       T02995                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102702932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102702932
Enzymes [BR:obr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     102702932
Transcription machinery [BR:obr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     102702932
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 102702932
NCBI-ProteinID: XP_006652896
LinkDB
Position
4:19351824..19363372
AA seq 1250 aa
MEEPPKDNGQSSGGADPEMEPMILDDGIEGISHSMDDANGHSSMDVDRGLHSVDIMGSSM
GDDGKGKHNSHAQIPIDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELF
DSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARL
QNMTYSSKMKVEVHIQVYSMEKSDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLC
WLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIY
IKLIDSTKNEDRKIISISFLYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISA
TIKESDELCEGFRKSDRARQYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLG
YMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSD
RELQELDRYLDASIITNGLNRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKT
RQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFI
SCGMNKLHEIPTEEVPKMDKIFLNGDWVGSCTDPASFVLRLRCMRRSGLIGPQVEIKWDK
HQREVRVFSDAGRILRPLLVVENLNKIRRPKGGSYSFQSLMQQEIIEFIGVEEEEDTKSA
WGIRHLFGSEGEKAALVKTNRTEDAFTIRRDIEEGVSGYTHCELDLSFLLGLSCGIIPFA
NHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVVADCIGRSEYT
FGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVEN
KSAPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDH
SIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLESQE
NFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITD
QLHKAGFSRWGAESVLNGRTGERMHSLIFMGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQ
PVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCERVANVIMRPV
PGGKKIRGPYCGFCRSSENIARINVPYGAKLLYQELFSMGICLRFETEVC
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggaagagccaccaaaggacaatgggcaatcgtccggtggtgctgatcctgagatggaa
cccatgatactggatgatggtatagaaggaatatcccatagcatggatgatgcaaatgga
cattcctctatggatgttgacagaggactccattctgtggatattatgggatcatccatg
ggtgatgatggtaaagggaagcacaactcacatgcacaaattccaattgacatgagtatt
ccaagcctagagaaattctgcaaagaagcatcaaggtccttctttgatgagattggtcta
atcagccatcagataaattcttataatgattttgtcgcatacgggctccaggaacttttt
gattctcttggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggt
ggttggagacatgctatcatcaagtttggaagagtgaaactagaagaaccagtattttgg
gctcatggatatgatattgatgaagaatcactcaaactgaagccaaggcacgctcgccta
cagaatatgacatattcttccaaaatgaaggtggaagttcatatccaggtttactctatg
gagaagagtgacaaggctaaaacagggaatgataaattcagttacaagaaagacattatt
aacgaaactcactatataaattttggccgccttccagttatggttatgtcaaatttatgt
tggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatc
aagggaatggagaaggtatttattgcgcaagagcaaaaatgcctgactaggatttgggtt
gaggaacgtccatgctggacagtctctttcttgtctgcaatcagaagaaggcgtatatat
ataaaactaattgattctacaaagaatgaagatagaaaaatcatttccatctcctttttg
tatgcaaatatgccaatctggttgatgttttttgcactaggcataacatcagataaagat
gtctttgacgtgatagatatgcaagattgtgatgcttgtgttatcaacacaatttctgca
actattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagatagagcccggcag
tatgttgatgaattgatcaaggattcaaaatttcctcctggagagccatttgatgattat
gttgctagatatctcttccctggcataagtgggaacaggaacaaagcacttttcttaggt
tacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggat
gatttccggaacaagaggttggatctagctggtgaattgcttggaagagaacttcgtgca
catattaggcatgcagagaggctcatggttaaggccttgcagagagatttaaatagtgac
cgtgagttacaagagcttgatcgttatctggacgcttcaattattactaatggtttgaac
cgggccttttccactggttcttggtgccatccctacaaaaaaaatgaaagatgtgcagga
attgttgcaacactaaggagaacaaatccacttcagatgatctcagacttgaggaaaacc
cgccagcgggttgcttatgctgggaaagctggtgacgcaagatatccaaatccatcctac
tggggaaaattgtgttttatgtccacacctgatggtgagaactgtggacttgtgaaaaat
ctagctgttacagctgttgttagctccagagtggcacaaccagtgattaacaggttcatt
tcttgtggaatgaataagctgcatgaaattcctacggaggaggttcctaaaatggacaaa
atattcctgaatggggattgggttgggtcctgtactgatccggcttcatttgtcttgcgt
ttaaggtgcatgagacgcagtggtctgattggtccacaggttgaaataaaatgggacaag
caccaaagggaagttcgggtattttctgatgcaggtcgaatcctcagacccttacttgtg
gttgaaaatctcaataaaataaggagaccgaaaggtggttcatattcatttcagtcacta
atgcaacaagaaataattgagtttattggcgttgaagaagaggaagacacaaaaagtgca
tggggaatcaggcacctatttggtagtgaaggagaaaaggctgccctggtaaaaacaaac
agaacagaggatgccttcaccattagaagggacatagaagagggggtttcaggttatacg
cactgtgaactggatctttcttttctgctaggattgagttgtggtattatcccttttgca
aaccacaattttgctcgaagggtactttaccaatcagaaaaacattcacaacaagctatt
ggatactctacaacaaatccacacatcagagttgataccctttcccatcaactttactac
cctcagagaccccttttcaaaacagtggtagctgactgcattggtagatcagaatatact
tttgggagaaaggatgactttgccagaccagaatatttcaatggccaaaatgccatagtg
gcagtgaatgttcatcaggggtttaatcaagaagattctctcgttatgaacagggcctct
cttgaacgtggcatgtttaggactgagcatttcaggaactataaggctgaagtagagaac
aaaagtgcgccaggtggcaacaaaagactcaaaatgaaggataagatagactttggtaaa
atgcaaagcaagagagggcgtgttgacaatcttgacgatgatggattaccatatgttggt
gcaagtcttcagagcggtgacattgtcattggaaaggtctcagagtctggtgaagatcat
agtattaagctgaagcatactgaaaagggtatggtgcagagggtattgctttcagctaat
gatgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgccttgga
gacaaattttcaagcatgcatggccagaaaggtgtaattggttttctagaatcacaggag
aatttcccttttacgtgccaaggaatagtaccggatattgtgataaatccgcatgccttt
cctacccgtcaaactccaggtcagcttcttgaagctgctttggggaagggaattgccctg
ggtggtacaatgagatatgctacaccattcacaacagcatcgtttgatgtgatcacggac
caattgcacaaggctggattttcgagatggggggctgaaagtgttcttaatggacgaact
ggtgaaaggatgcactcgttgattttcatgggtcctaacttttaccagaggctgatacat
atggcagaagataaggtaaaattcaggaacacagggccagtgcaccccttaacacgccaa
cctgttgctgacaggaaaaggtttgggggagtgaagttcggagaaatggagcgtgactgc
ctccttgcccatggggcagcagccaatctccatgagcggctcttcatgcttagtgacttc
tcccagatgcatatctgccagacgtgcgaacgtgtggcaaatgttatcatgaggcctgtc
cctggaggaaagaagatccgggggccatactgtgggttctgccgctcttcagaaaacata
gcaaggatcaatgtgccctacggagcaaagctgctttatcaggagctattcagcatgggg
atctgccttagatttgagacagaagtctgctag

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