KEGG   Oryza brachyantha (malo sina): 102709479
Entry
102709479         CDS       T02995                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03020  RNA polymerase
obr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102709479
  09124 Replication and repair
   03420 Nucleotide excision repair
    102709479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102709479
   03400 DNA repair and recombination proteins [BR:obr03400]
    102709479
Transcription machinery [BR:obr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102709479
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102709479
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom DNA_RNApol_7kD zinc_ribbon_4
Other DBs
NCBI-GeneID: 102709479
NCBI-ProteinID: XP_006658815
UniProt: J3MMZ0
LinkDB
Position
7:complement(16210786..16213687)
AA seq 114 aa
MSALKFCGECNNMLYPREDKETRTLLYACNSCEHQELATDTCVYKRVIRKSAGVPKDILK
DAASDPTLPRTRSIRCYNCGHPEAAFFQAPTKGERGLTLYFICCNPSCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagcgctctcaagttttgcggcgaatgcaacaacatgctgtacccgcgggaggacaag
gagacgcgcacgctgctctacgcctgcaattcctgcgagcaccaggagcttgccactgac
acgtgtgtgtacaaaagggttatccgtaaatctgctggggtacctaaagatatattaaaa
gatgcagcaagtgatcccactctgcctcgcaccagaagtattagatgttacaactgcggc
catccagaggctgcttttttccaggctccaaccaagggagagcgaggcctgacgctttac
ttcatctgctgcaacccgagctgtggtcacaggtggagggattga

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