Oryza brachyantha (malo sina): 102721283
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Entry
102721283 CDS
T02995
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102721283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102721283
Enzymes [BR:
obr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102721283
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102721283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102721283
NCBI-ProteinID:
XP_006656244
UniProt:
J3MFS6
LinkDB
All DBs
Position
6:16903305..16924356
Genome browser
AA seq
1756 aa
AA seq
DB search
MADVRPDQAASEEVESIHFSFYNDDEIKRISVKQITKPDRLDAKNCPVPGGLLDPAMGPT
SDTDTCKSCGQHSVRCPGHFGHIELAKPLFNPLLFLSLKNLLHMTCFHCHKFRLNREQVD
RYTDELELLVKGDIAHAKNLEDSGGKVLLEEDDKTEATSGDKSTCSESENKTWTSIQLKE
VLSIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAIADAKLSGDVRFH
DSRETGVSGLDEELTSPGTSSRGSTNETRRISDDTIKEMVASSGKKHLLATEVESILKDL
WKNEARFCMLLCDFQQNTLNVSEKKRGYEMFFLKNLLVAPNRFRPSIHSSLGIMEHPQNI
LLSKVQEANLALQQSNAASNHMEVLRRWMDMQRSVNVLYDSSKGLAKNEKNANGIRQLLE
KKEGILRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNARKLQE
AINNGADIHPGATHYRDNNNMYKLQAAPAKRRAIAKMLPASRGSISQAGKDPKCEFESKV
VYRHLQDGDVVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADFDGDEMNVH
FPQDEISRAEAINIVDANKQYIGPRSGDAVRGLIQDHIVGAVLLTKLDTFLSREEYNQLV
YGSCVFSSTRRSAKFGKKISIIMDDDALEPVPPAIWKPKPLWTGKQVITTILNHVTKGHP
PFTVMQTGKISKEYLLPKKCDAVQFNKRKCDDAKDKTRDPKEHKKCDGIHVKKRKCDGSK
DKTKDPKERGNEDKTRDRSELVLYVHDNELIKGMIDKAQFGKDGIVHTVHELYGPDAAGV
LLSSFSRLFTMVLQFHGFTCGVDDLLLCQASDELRKEILGTSEECSKIVHKEFICPQNKK
GDEAEDTRPKEDGKAEDMCLKEDNEAEDTRSKEGVEDQVKLQMEVERVIRRNRESATVML
DRKMSNTLNVITSKVNQELFPYGLQKPFPGNCLSLMTQTGAKGGLVNMTQISSLLGQQEL
EGKRVPRMISGKTLPCFPSWDTSARAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVK
TSRSGYLQRCLIKSLESLKVSYDHTVRDVDGSIIQFCYGEDGVDVLKTSFLDKFKELADN
RKAVLHKLDGLNDKHLLSNPNGYISKLPVKLIGSAMKFLKETEKKKLCRYDIEEEELMKL
LKAKYLSSLVDPGEAVGVVAAQSIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLKELLMTA
SAKISTPFMKCPMLEDKTRDDDEQIDAELKKVRDAERRAAKREKIRDAQRMAVKLRRIRV
ADVVERIEVCTVPFHNNNGCVSTLYKLQMKLYPRELYPPESELTVDECQETLRTVFIDAM
DLAISKHLDLLHKINAIQAVKVNDTESQPSDGVEESENGPTDDGNGLSDGENEDDLGADA
QKWKQQEIDEMEYDDDAEKEESSDMDSESEDDTKFKPESEDDRPKLGEELEETEEGHVLD
SSYKGKNSKATQATARLQDERNKVADEKAQVTIKFKKNIKWTIHYESTGLNFEVHYALQE
QPHILLAQIAQRTARSVFIKACSNIDQCTVNKIDVDSDKIDEAIVLQTVGVNFGVFWNLV
DYLDINEVRSNDIYAVLKTYGVEAARATIIEEVSGVFGAYGIDVNKRHLSLIADFMTFDG
GYRPMSRNGMGQFSTSPFGKMTFETATKFIVEAASHGESDTLDSPSASICLGKPVKMGTG
TFGLLQNFCLEQPAAM
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgcggcccgaccaggctgcatcggaggaagtggaatctatccacttcagc
ttctataatgatgatgaaattaagaggataagtgttaaacagataacaaagccagaccgt
cttgatgccaagaactgtcctgtgccaggtgggttacttgacccagcaatggggcccacg
agcgataccgacacctgcaagagttgtggtcagcattctgttcgctgccctggccatttc
ggccatattgagttggcaaagccactatttaatccgttgctttttttgagtcttaaaaac
cttctccatatgacatgcttccattgccacaagttccgcttgaacagagaacaggtagac
agatacacggatgagcttgaactgttagtaaaaggtgatattgcccatgctaaaaatttg
gaagactcaggtggcaaagtacttttggaggaagatgataaaactgaggccacttcaggt
gataaatcaacttgttctgagagcgagaataaaacctggacatcaatccaactgaaggag
gttctttcaatttttgcgaactttatgaagaaaagacagaagaaatgcacacactgtaac
aaaaagaatccaaagatctcacatcctatatatggttggttgatcaaggatgcagatatt
tccgctgtaagagcaaatgcgattgctgatgctaaactgagtggagatgttcgttttcat
gactcaagggaaactggtgtttctggtcttgatgaagaactaacttcacctggaacttcg
tccagaggatcaaccaatgaaacaagacgcatttctgatgacacaatcaaagaaatggtg
gcatcatcaggaaagaaacatctcttagctacagaggttgaatctattctgaaagatttg
tggaaaaacgaagcaaggttctgcatgttactttgtgatttccaacagaatacactgaat
gtatcagaaaagaaaaggggctatgagatgtttttcttgaagaatctgcttgtggcaccg
aacagattccgcccttcaattcactctagtcttggaatcatggaacatcctcaaaatatt
ctgctcagtaaagtgcaagaggccaatcttgcgcttcagcagagcaatgctgcttctaat
catatggaagttcttcgaagatggatggatatgcaaagaagtgtaaatgtgctgtatgac
agtagtaaaggccttgcaaaaaacgagaagaatgcaaatggtataaggcagttgttggaa
aagaaagaagggattcttcgacagaagatgatggggaaaagagttaattatgcatgccgg
tccgttatatctccagatccatatttggctgtaaatgaaattgggattcctcccgttttt
gccacacggttgacatatcctgagaaagtgacaccctggaatgccagaaagctacaagaa
gctataaacaatggtgctgacattcatccaggtgcaacccattacagggataacaataac
atgtataagctacaagctgcccctgccaaacgccgtgccattgctaagatgctacctgct
tctagaggatcaatttctcaggcagggaaagatcctaagtgtgaatttgagagcaaagtg
gtatatcgacaccttcaagatggtgatgttgtactagtcaacaggcagcctactcttcac
aagcccagcatgatggcgcattttgttcgtgtgctgcctggagagaagacaattcgaatg
cactatgccaattgcagcacatacaatgctgattttgatggagatgaaatgaatgtgcac
ttcccacaagatgaaatatctcgtgctgaggccatcaacattgttgatgcaaataagcag
tacattggtccaaggagtggggatgctgtcagaggcctcattcaggatcatattgtcggt
gctgtactcctgacaaagctggacacctttcttagccgcgaggagtataatcaacttgta
tatgggtcttgcgtgttctcttcaactcgtagatctgcaaagtttggtaaaaaaatatct
attattatggatgatgatgcactcgaacctgtacctcctgctatttggaagccaaagcct
ctatggacaggaaaacaggttataacaaccatcttgaaccatgtgacaaaaggccaccct
ccatttactgtgatgcaaacggggaaaatttcaaaagaatatctactccctaaaaagtgt
gatgctgttcagttcaataaaagaaagtgtgatgatgctaaagataaaactagagatcct
aaagagcataaaaagtgtgatggtattcatgtgaaaaaaagaaagtgcgatggttctaaa
gataaaactaaagatcctaaagagcgtggcaatgaagataaaactagagatcgttctgag
ctagttttgtatgttcatgacaatgagctcataaaaggcatgatagataaggcccagttt
gggaaggatgggattgttcatacagttcatgaattatatggtccagatgcagctggcgta
ctactgtcatcattcagccgcttgtttacaatggtcttgcagttccatggatttacatgt
ggagtagatgatctgttgctatgccaagcgtcagatgagctgagaaaggaaattcttggg
acaagtgaagaatgcagtaaaatagtgcataaagagtttatatgcccccaaaacaaaaag
ggtgatgaagctgaagatacacgacccaaagaagatggtaaagctgaagatatgtgtctc
aaagaggataatgaagctgaagatacacgttccaaagagggtgttgaagatcaagtgaag
ttgcaaatggaagtcgaacgagttatacgaaggaacagagaaagtgcaacggttatgttg
gatagaaaaatgtccaatactctgaatgttataacatctaaagtcaatcaagaattgttt
ccttatggtctacagaagccttttcctggaaattgtctctctcttatgactcagactgga
gcaaaaggtggtttggtcaacatgacacaaatttcgtcattgctaggacagcaagagtta
gaaggaaagcgtgttccacgaatgatttctgggaagacgttaccttgctttccatcatgg
gatacttctgcaagagctggtggtttcatcagtgatcgatttttaactggtctccgtcct
caagagtactattttcactgtatggctggcagggaggggttggttgacacagcagtcaaa
acttctcgtagcggataccttcagcgttgtcttatcaaaagtctcgaatcattaaaagtc
tcatatgatcacactgtacgtgatgttgatggatcaatcatacagttttgctatggagaa
gatggagttgatgtgctcaaaactagcttcctagacaaattcaaagagcttgctgataat
agaaaagctgtccttcataagcttgatggccttaatgacaagcacctgttatcaaatcca
aatggatacatttctaaattgcctgtcaagctgattggcagtgcaatgaagtttctaaag
gaaacagaaaaaaagaaactctgccgttatgacattgaggaggaggagctaatgaagtta
ctgaaagccaaatacctatctagtcttgtagatcctggggaagctgttggtgtggttgct
gctcagtccataggagaaccatcaacccagatgacactcaacacttttcatcttgctgga
cgaggtgagatgaatgttacacttggtattcctcgtttgaaagaacttctaatgactgcg
tcagctaaaattagtacaccttttatgaagtgccctatgcttgaagataagaccagggat
gatgatgaacaaattgatgctgaattaaagaaggttcgtgatgctgaacgaagggctgct
aaaagggagaagattcgtgatgctcaaagaatggctgttaaattaaggaggattcgtgta
gctgatgttgtggagagaattgaagtatgcacagttccttttcacaacaataatggttgt
gtttcaaccctttataagttacagatgaaactctacccacgagagctatatccacctgag
tcagaacttactgtagacgagtgccaagaaactttgagaactgtttttattgatgcaatg
gatcttgcaatcagcaagcatttagatttgctacataaaattaatgctatccaagcagtt
aaagtaaacgatacagagagccaaccgtctgatggagtcgaagagtctgaaaatggacct
actgatgatggcaatggcctgagcgatggtgaaaatgaggatgatttgggtgcagatgca
caaaaatggaaacagcaagagatagatgagatggaatatgacgatgatgctgaaaaggaa
gagagttctgatatggatagtgaatctgaagatgataccaaatttaagcctgagagtgaa
gatgatcgaccaaaattgggtgaagagttagaagagactgaggaaggacatgtgctagat
tctagctacaaggggaaaaattcaaaagctacacaagcaacagccagacttcaagatgaa
agaaataaagtcgcggatgaaaaagcacaagtgaccataaaattcaagaaaaatataaaa
tggactattcattatgaatcaacaggtttgaattttgaggttcactatgctttgcaagag
caaccgcatattctgttagcccagattgctcagagaacagctagatccgtttttatcaag
gcctgtagtaatattgatcaatgtacagtgaataaaatagatgtggattcagacaagata
gatgaagccattgttctacaaacagtaggggtgaactttggggtattttggaatttagtg
gactatctcgatatcaatgaggtcagatccaatgatatatatgctgtgctgaagacatat
ggggtagaggctgcaagggcaaccatcattgaggaagtgagcggtgtattcggtgcttat
ggtatagatgttaacaagaggcatctgagtttgattgcggatttcatgaccttcgacggc
ggttaccgaccgatgagcaggaatgggatgggccagttcagcacctcgccatttggcaag
atgacttttgaaacggcaaccaaatttatcgtggaagcagcttctcatggagagtctgac
acactcgacagcccttcggcaagcatctgtcttgggaaaccggttaagatgggaactggt
accttcggcttgctgcagaatttttgcctagagcaacctgctgcaatgtag
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integrated database retrieval system
