Opitutaceae bacterium TAV5: OPIT5_12380
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Entry
OPIT5_12380 CDS
T03683
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obt03009
]
OPIT5_12380
Enzymes [BR:
obt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OPIT5_12380
Ribosome biogenesis [BR:
obt03009
]
Prokaryotic type
ribosomal protein modification factors
OPIT5_12380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AHF90887
UniProt:
W0IXF9
LinkDB
All DBs
Position
complement(2831101..2832513)
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AA seq
470 aa
AA seq
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MLKVSLVSLGCAKNLVDSEIMVGHLHKAGMTVVPETEKADVVIVNTCSFIDSSKEESINH
ILAAHQARGLSKRRSGQKLIVAGCMSQRFSKELPSAMPEVDAFIGLDQLTQVAPIIEEIT
GLKRGRKDAPANYIQGRSTYIPDYDTPRFRLTPKHTAYIKIAEGCNHPCAFCIIPQIRGR
HRSRTVESVVAEARQLVAEGVKEINLISQDTTYFGMDTWEQRPNPRTPVDSSRGTALTTL
LRELNAIEGDFWIRLLYTHPAHWSDELIRTIAACPKVARYIDIPLQHISDHMLGLMQRET
SGDYIRDLIARIRAGIPGIAVRTTFIVGFPGETEDDVEELCRFIRDTQFERLGVFRYSQE
EGTKAARMADQIPFKEKDARWHRTMSLQKEIAAQVSERHVGQKLRVLVEEPGIARGEADA
PDIDGRVYVPRELPVGEFADVTITGFADYDLLALPQGEAPRERKVAKQAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagtcagtctcgtctcactcggttgcgccaagaatctcgtcgatagcgagatc
atggtcggccatctccacaaggccggcatgacggtcgtgcccgaaacggagaaagccgac
gtcgtcatcgtcaacacctgctccttcatcgactcgtccaaggaagaatcgatcaaccac
atcctcgccgcccaccaggcccgcggcctctccaaacgccgttcgggacaaaaactcatc
gtcgccggctgcatgtcgcagcgcttttcgaaagagctgccgtccgccatgcccgaggtg
gacgccttcatcggtctcgaccagctcacgcaggtcgcccccatcatcgaggagatcacc
ggcctcaaacgtggcaggaaagacgctcccgccaactacatccagggccgctccacatac
attcccgactacgacacgccgcgcttccggctcacccccaaacacaccgcgtacatcaag
atcgccgagggctgcaaccacccctgcgccttctgcatcatcccgcaaatccgcggacgc
caccgctcgcgcaccgtcgaaagcgtcgtcgccgaagcccgccagctcgtcgccgagggc
gtgaaggagatcaacctgatctcgcaggacaccacctacttcggcatggacacctgggag
cagcgccccaacccgcgcacgcccgtcgattcctcgcgcggcaccgcgctcaccacgttg
ctccgcgagctcaacgccatcgaaggggatttctggatacgcctcctttacacgcacccc
gcgcactggagcgacgaactcatccgcaccatcgccgcgtgccccaaggtcgcccgctac
atcgacatcccgctccagcacatcagcgaccacatgctcggcctgatgcagcgcgagacg
agcggcgactacatccgcgacctcatcgcccgtatccgcgccggcatcccgggtatcgcg
gtgcgcacgaccttcatcgtcggcttccccggcgagacggaagacgatgtcgaggagctg
tgccggtttatccgcgacacgcagttcgagcgcctcggcgtcttccgctactcgcaggaa
gaaggcacgaaggccgcccgcatggccgaccagattccgttcaaggaaaaggacgcccgc
tggcaccggacgatgagcctgcaaaaggaaatcgccgcgcaggtcagcgagcgccatgtc
ggccagaaacttcgcgttctggtggaggagcccggcatcgcccgcggcgaagccgacgcg
cccgacatcgacggccgcgtgtacgtgccgcgcgaattgcctgtcggcgaattcgccgat
gtcaccatcaccggtttcgccgactacgacctgctcgccctcccgcaaggcgaagccccg
cgcgaacgcaaggtggcgaagcaggcgcagtga
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