Afipia carboxidovorans OM5 (Mississippi): OCAR_5223
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Entry
OCAR_5223 CDS
T00783
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00071
Fatty acid degradation
oca00280
Valine, leucine and isoleucine degradation
oca00310
Lysine degradation
oca00362
Benzoate degradation
oca00380
Tryptophan metabolism
oca00410
beta-Alanine metabolism
oca00640
Propanoate metabolism
oca00650
Butanoate metabolism
oca00907
Pinene, camphor and geraniol degradation
oca00930
Caprolactam degradation
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
oca01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OCAR_5223
00650 Butanoate metabolism
OCAR_5223
09103 Lipid metabolism
00071 Fatty acid degradation
OCAR_5223
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OCAR_5223
00310 Lysine degradation
OCAR_5223
00380 Tryptophan metabolism
OCAR_5223
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OCAR_5223
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OCAR_5223
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OCAR_5223
00930 Caprolactam degradation
OCAR_5223
Enzymes [BR:
oca01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OCAR_5223
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OCAR_5223
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OCAR_5223
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
ApbA
Methyltransf_31
DAO
NAD_Gly3P_dh_N
Pyr_redox_2
Sacchrp_dh_NADP
Methyltransf_12
AlaDh_PNT_C
Pyr_redox
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ACI92355
LinkDB
All DBs
Position
1196789..1198870
Genome browser
AA seq
693 aa
AA seq
DB search
MDSKILNAMKDHVLELGPEPSSGPYRHFKLTRDEDGIAWLLFDREGASANTLSSEVLEEF
SQILSVLESERPSGLVLRSAKRSGFIAGADINEFRGLSDVSIVEQQLGHGHDILNRLENI
KLPTVAVIHGFCLGGGLEVVLACNMRIAIEGARFGFPEILLGLHPGFGGTARATHLFNPL
EAMTMMLTGKTVEARKAKALGLVDAVTQERHVRNAVKDAIFGRLKRKRLKLTTLMNLGPA
RKLLASRMRKEAANKAPQENYPAPYALIDLWEKHGGNRADMLAAEKPSFAKLMVTSTAQN
LIRVFFLRDEMKKLAGGKSKIRHVHVIGAGAMGGDIASWCAHQGLRVTLADMQPAAIANA
MKRAADLFAKIARGRIAQRDTLDRLIPDMTGEGAKQADLIIEAVPEKLQLKQSIYAGLEK
VMRPDAILATNTSSIPLEELRASLQRPERLLGIHFFNPVSRLQLVEVISHDQVDQEALAT
AMKFVGGIDRLPLPVKSSPGFLVNRALMPYLMEALLMLDEKVDKLTIDEAAEKFGMPMGP
IELADQVGLDICLAVGDELRAKLGDSIPVAPDWLRDKVAKGELGRKTGRGFYEWKDGRVQ
KGHAHVHATPEMTDRLVLPMSNVCVACLREGIVDNPDTVDGAMIFGTGYAPFRGGPLNYA
RERGPENVANALLVLAEKYGERFKPDAGWATFR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaaatcctcaatgcgatgaaggaccacgtccttgaactcgggcctgagccg
tcgtccggaccttatcgccatttcaagttgacgcgcgacgaagacggaatcgcctggctg
ctgttcgaccgcgaaggcgcaagcgccaacacgttgtcgagcgaggtgctggaagaattc
tcgcagatcctctcggtgctggagagcgagcgcccgagcgggcttgtgctgcgctcggcc
aagcgctccggcttcatcgcgggtgcggacatcaatgaattccgcggtctctccgatgtc
agcatcgtcgagcagcagcttggtcacgggcatgacattctcaaccggcttgagaacatc
aagctgccgacggtcgcggtaatccacggcttctgcctcggcggcgggcttgaggtcgtg
ctcgcctgcaacatgcggatcgcgatcgaaggcgcacgcttcggattcccggaaatattg
ctcggcctgcatccgggctttggcggcacggcgcgcgcaacgcatctgttcaatccgctc
gaagcgatgaccatgatgctgacgggcaagaccgtcgaggcgcgcaaagcgaaggcgctc
ggccttgtcgatgctgtgacgcaggagcgccacgttcgcaatgcagtgaaggatgcgatc
ttcggtcgcctgaagcgcaagcgcttgaagctgacgacgttgatgaaccttggtccggcc
cgcaagctgctggcttcgcgcatgcgtaaggaggctgccaataaagcgccacaggagaat
taccccgcgccctacgcgctgatcgatctgtgggagaagcacggcggcaaccgcgccgac
atgctggcggcggagaagccgtccttcgccaaactgatggtgacgtcgaccgcgcagaat
ctcattcgtgtgttcttcctgcgcgacgagatgaagaagctcgcgggcggcaagagcaag
atcaggcatgtccatgtgatcggcgccggtgcgatgggcggcgacattgcgtcgtggtgc
gcgcatcagggcctgcgcgtgacgcttgccgacatgcagccggcggcgattgcgaatgcg
atgaagcgcgcggcagatctgtttgcgaagatcgcccgcggccgcattgcccagcgcgac
acgcttgatcgtttgattccggacatgacgggagaaggcgcaaagcaggcggatctcatc
atcgaggccgtgccggagaagttgcagctcaagcaatcgatttatgccggccttgaaaaa
gtgatgcggccggacgccatcctcgcgaccaacacgtccagcattccgctcgaggagttg
cgcgcctcgctgcagcggccggagcgattgctcggcatccatttcttcaatccggtgtcg
cggctgcaactggttgaagtgatcagccacgatcaggtcgatcaggaggcgcttgcgacc
gcgatgaagttcgtcggtggaatcgatcgcctgccgctgccggtgaagagttcgccgggc
ttcctcgtcaaccgcgcgctgatgccgtatctgatggaagcgctgctgatgctcgacgag
aaggtggacaaactcaccatcgacgaggcggcggaaaagttcggcatgccgatgggcccg
atcgaactcgccgatcaggtcggcctcgatatctgtcttgcggtcggcgatgagttgcgc
gccaagcttggcgattccattccggttgcgcctgactggttgcgcgacaaggtcgcgaag
ggcgaactcggtcgcaagaccggacgcggattctacgaatggaaggacggccgcgtgcag
aagggccatgcccatgttcacgccacgccggaaatgaccgatcgccttgtgctgccgatg
tcgaacgtctgcgtcgcctgtttgcgtgaaggcatcgtcgacaatcccgatacggtggac
ggcgcgatgatcttcggcaccggctatgcgccgttccgcggcgggccgctcaactacgca
cgcgagcgtgggccggagaatgtcgccaacgcgctcttggtgctggcggagaaatacggt
gagcgcttcaagccggatgccggctgggcgacgtttcgctga
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