Afipia carboxidovorans OM5 (Mississippi): OCAR_5565
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Entry
OCAR_5565 CDS
T00783
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00270
Cysteine and methionine metabolism
oca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OCAR_5565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_5565
03032 DNA replication proteins [BR:
oca03032
]
OCAR_5565
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_5565
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
oca02048
]
OCAR_5565
Enzymes [BR:
oca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
OCAR_5565
Transcription factors [BR:
oca03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
OCAR_5565
DNA replication proteins [BR:
oca03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
OCAR_5565
Chromosome and associated proteins [BR:
oca03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
OCAR_5565
Prokaryotic defense system [BR:
oca02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
OCAR_5565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ACI92696
LinkDB
All DBs
Position
1518124..1520382
Genome browser
AA seq
752 aa
AA seq
DB search
MNVRVDPGSELIEEIVIDSFAGGGGTSEGIVAALGRDPDIAINHDKFALAMHRINHPGTE
HLIEDVVTVDAISMCAGRPVGMLWMSPDCKDHSKAKGGKPRDKNIRGLAWAVFGWVKALP
KWQRPRVVFLENVEEFQDWAPLDENGKRCALQKGAIFKNFVASWEALGYVVEWRERRAWR
AGRKMQAATIRKRLYMIMRRDGEPIVWPEPTRGNPNDVEDAAKIAAGLLTPWKTAADCLD
WSLPCPSIFETSAEIKAKHGIRANRPLAASTMARIAKGTSRYVLEALRPFLVPVTHSGPP
RANSADEPLRTITSAHRGEIAIMTPFVTKFQTGSVGHPASEPLHTITSHASDHHGGGAAP
LGIVAPVLVRTAHGDVGADGKRRGRGDHDAQQPMPTVLATNDVAVVAPVLVGCGGRAAQT
EPRAADDPIITQTGKADLCVSTAFMVPRYQERPGQEPRTRSIEQPVGTIVPDGNEGSIAA
VHLATMRNSQKPFNDADKPVHTLTAGGANISVVSAFMAQHNIDGRTGQGNPGHPVDDPVS
TITTAGSQQSVVTAHMINLRGEDRRDSPADHPTQTATAGGTHLGAVLGFLAKYYGEGLPS
QSAGEPLHTVTAKPRFGLVEASAALPPFGPEHEARARQVADFLRAHGYWDEREFVTVEID
GLTFVIVDIGMRMLTARERFTAQGFRPDYIIDRGILEDGTVIKFTAEQQGYMCGNSVCPP
EAEDLIFANYQRRKVKRPRRTASAMPLLEAAE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgagagttgatcccgggtctgagctgatcgaagaaatcgtcatcgacagtttc
gcaggtggtggcggcacgtcggaaggcatcgttgccgcgctcggccgcgacccggatatc
gcgatcaatcacgacaagttcgcgctcgcgatgcatcggatcaaccatccgggcaccgaa
catctgatcgaggacgtcgtgacggtcgacgccatcagcatgtgcgccggtcggcccgtt
ggcatgctctggatgtcgcccgactgcaaggatcacagcaaggccaagggcggcaagccg
cgcgacaagaatattcgcgggctggcgtgggccgtgttcggctgggtgaaggcgcttccg
aaatggcagcggccgcgcgtggtattcctcgagaacgtcgaagaatttcaggattgggcg
ccgctcgacgagaatggaaagcgttgcgctcttcagaagggagccatcttcaagaacttc
gtcgcctcgtgggaagcgctcggctacgtcgtcgagtggcgcgagcgccgcgcctggcgc
gcgggtcggaagatgcaggcggccacgatccgcaagcggctttacatgatcatgcggcgg
gacggcgagccgatcgtgtggcccgagccgacacgcggcaaccccaacgatgtcgaggac
gcggcgaagatagcggccgggctcctgacaccttggaagacggcggccgattgcttggac
tggtcgttgccgtgcccgtcgatcttcgagacatcggcggagatcaaggcgaagcacggc
atccgagcgaaccgtccgttggcggcgagcaccatggcgcgcatcgccaagggcacctcg
cgttacgtgctcgaagcgctccgcccattcctcgttcctgtgacgcacagcggcccgccg
cgcgccaacagcgcggatgagccgcttcgaacgatcacgtcggcgcatcgcggcgagatt
gcgataatgacgcctttcgtcacgaaatttcagactggatcggtcggccatccggcgagt
gagccacttcatacgatcaccagccacgccagcgaccaccatggcggcggtgcggcgccg
ctcggcattgtcgcgccggtgctggtcaggacagcgcacggcgatgtgggagccgatggc
aagcggcgcggtcgcggcgaccatgatgctcagcagccgatgccgaccgtgctcgcgacc
aatgacgttgccgttgttgcccccgtgctggtcggctgtggcggacgtgccgcgcagacc
gagccgcgtgcggccgatgatccgatcatcacccagaccggcaaggctgacctgtgcgtc
tcaaccgcgttcatggtgccgcgatatcaggagcggcccggacaggagccgcggacgcgt
tcaatcgaacagccggtcggcaccatcgttcctgacggtaacgagggcagtatcgctgcg
gtccacctcgcgacgatgcggaattctcagaagccgttcaacgacgcggacaagccggtc
cacacgctgacggctggcggcgcgaacatcagcgtcgtgtccgccttcatggcgcagcac
aatatcgacggcaggaccgggcagggtaatccgggccatccagttgacgatccggtatcg
accatcacgacagccggtagtcagcaatcggtcgtaaccgcgcacatgatcaatctgcga
ggcgaagatcggcgggactcgccggctgatcatccgacgcaaaccgccaccgctggcggc
acccatcttggcgctgtgctcggcttcctcgcgaagtattacggcgagggacttccgagc
caatcggcgggcgagccgctgcacaccgtcacggcgaagccgcggtttgggctggtcgag
gcctcggccgcgctgccgccgttcggccccgagcacgaagcgcgcgcccgccaggttgcc
gattttctgcgcgcgcatggctattgggatgagcgcgagttcgtcactgtcgagatcgac
ggcctcacattcgtcatcgttgacatcggcatgcgcatgctcacggcgcgcgagcgcttc
accgcgcagggcttccggccggattacatcatcgaccgcggcatcctcgaggacggcacg
gtcatcaagttcaccgctgaacagcaaggctacatgtgcgggaattcggtctgcccgccc
gaggcagaggatctgatcttcgcgaactaccagcggcgcaaggtgaagcggccgcggcga
accgccagcgcgatgccattattggaggctgcagaatga
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