Ochrobactrum sp. BTU1: KMS41_03530
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Entry
KMS41_03530 CDS
T09943
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ00190
Oxidative phosphorylation
occ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
KMS41_03530
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KMS41_03530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
occ03019
]
KMS41_03530
Enzymes [BR:
occ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
KMS41_03530
Messenger RNA biogenesis [BR:
occ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KMS41_03530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
DUF4633
RE_NgoFVII
PLDc
Motif
Other DBs
NCBI-ProteinID:
QWK78325
LinkDB
All DBs
Position
1:731667..733961
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AA seq
764 aa
AA seq
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MNENSVVATQAADLTAHVADQAANDHSANQNASKVQNAHEALNTDKTAELMQSPERFVNR
EFSWLQFNRRVLEEAGNTRQPLLERLRFLSISAANLDEFFMVRIAGLAAQVRAGVAMRSA
DGRTPQEQLDFVLEEVGRLQEGQQERLRTLREELEKENIEIVRASTLSKTEKDWLEGHFL
ETIFPVLTPLSIDPAHPFPFIPNLGFSIALQLARRLDGHPMTALLRIPVALKRFIQLPTE
QQNAFRFITIEDAVSLFIGRLFPGYEVRGAGTFRIIRDSDIEVEEEAEDLVRLFETALKR
RRRGQVIRIEFDAEIPEALRVFVATELGVSENRISVLEGLLALNMISEVVSIPRDDLKFV
SYNPRFPERIREHGGDCFAAIREKDIVVHHPYESFDVVVQFLRQAAADPDVLAIKQTLYR
TSNDSPIVRALVDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTH
AKMSLVVRREDQKLRSYVHLGTGNYHPITARIYTDLSFFTSDADIARDVAHIFNFITGYA
QPAEEMKIGISPLTLRTRILKHIDDEITNAKAHKPAAIWMKMNSLVDPQIIDALYKASQA
GVHVDLVVRGICCLRPGVPGLSDNIRAKSIVGRFLEHSRIFCFGNGHDLPSDKAIVYIGS
ADMMPRNLDRRVETLVPITNATVHQQILSQIMFANIIDNQQSYQLLADGTSRRIEKEDGE
EAFNAQEYFMTNPSLSGRGKSLKSSAPRLIAHRKRAQAERNTTS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacagcgttgtggcaacccaggccgccgatttgaccgcacatgtggcagat
caggcggcaaatgaccattctgcaaaccagaatgccagcaaagttcaaaacgctcacgaa
gctttgaacactgacaagacagcagagctgatgcaaagccctgaacgcttcgtcaatcgc
gagttttcctggctgcagtttaaccgtcgtgttctcgaagaagcaggcaatacgcgtcag
ccactgctggagcgtctgcgcttcctgtcgatttcggcagccaacctcgatgaattcttc
atggtgcgtattgcagggcttgctgcacaggtgcgtgcaggtgttgccatgcgcagcgcc
gatggtcgcacgccgcaggagcagcttgatttcgttctggaagaagttggccgcctgcag
gaaggccagcaggaacgtctgcgtacgcttcgcgaagaacttgaaaaagagaatatcgag
atcgtacgcgcatcgaccttgtcgaagaccgaaaaagattggctggaaggtcacttcctg
gaaacaattttcccggttctgacgccgctttcaatcgatcctgcgcacccgttcccgttc
attccaaatctgggcttctcgattgcattgcagcttgcgcgtcgtcttgatggtcatccg
atgacggcgctgttgcgcattccggttgccctgaagcgcttcatccagttgccgaccgag
cagcagaacgcgttccgttttatcaccattgaagatgcagtcagcctgtttatcggtcgt
ctgttcccgggctatgaggtgcgcggtgccggtacattccgcatcattcgcgacagcgat
atcgaagtcgaagaagaagcggaagatctggtccgcctttttgaaacagctctgaagcgc
cgtcgccgcggtcaggtgatccgcatcgagttcgatgctgaaatcccggaagcgctgcgt
gttttcgttgccaccgaactgggtgtctcggaaaaccgcataagcgttctggaaggtctt
ctggcgctcaacatgatttcggaagtcgtttcgatcccgcgcgatgacctgaaatttgtg
tcttacaatccgcgtttccctgagcgcattcgcgagcacggcggcgattgctttgccgcg
attcgtgaaaaggacattgtggtccaccatccatatgaatcatttgatgtggtggtgcag
tttctgcgtcaggccgcagctgatccggatgtgttggcaatcaagcagacgctttaccgt
acctccaatgacagcccgatcgtgcgtgcgctcgtcgatgcggcagaagctggcaagtcg
gtcacagcccttgttgagctgaaggctcgcttcgatgaagaagccaatattcgctgggca
cgcgatctggagcgcgcaggcgttcaggtggtcttcggctttatcgaattgaagacgcac
gcaaagatgtcgctggttgttcgccgtgaagaccagaagctgcgttcttatgttcacctt
ggaacgggcaactaccacccgatcacagcgcgtatttacaccgacctttcattcttcact
tccgatgccgatatcgcacgcgatgtggcgcatatcttcaacttcatcaccggctatgcg
cagcctgctgaagaaatgaagatcgggatttcaccgcttaccttgcgcacgcgaatcttg
aagcatatcgatgacgagatcaccaatgcgaaggctcataagcctgcagccatctggatg
aagatgaactcgctcgttgatccacagattattgacgcgctttacaaggccagtcaggcg
ggcgtgcatgtggacctcgtcgtgcgtggcatctgctgtctgagaccgggtgttcctggc
ctctcagacaacattcgcgcaaagtcgattgtcgggcgttttctcgagcatagccgcatt
ttctgcttcggaaacgggcatgatctgccttcagacaaggcaattgtctatatcggttct
gccgatatgatgccgcgcaatctcgaccgtcgcgtagagacactggtgcccattaccaat
gccactgtgcatcagcaaatcctgtcgcaaatcatgtttgccaacataattgataaccag
cagagctatcagctacttgcggacggcacctctcgccggatagaaaaagaagatggagag
gaagctttcaacgcgcaggaatatttcatgacaaatccaagcttgtcgggtcgcggaaag
tcgctgaagtcatctgccccccgtctgattgcgcatcgtaaacgtgcgcaggcggaaaga
aacacgacttcatga
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