Oceanicola sp. D3: FHY55_00245
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Entry
FHY55_00245 CDS
T06139
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd00300
Lysine biosynthesis
ocd01100
Metabolic pathways
ocd01120
Microbial metabolism in diverse environments
ocd01230
Biosynthesis of amino acids
Module
ocd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FHY55_00245 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocd01002
]
FHY55_00245 (dapE)
Enzymes [BR:
ocd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FHY55_00245 (dapE)
Peptidases and inhibitors [BR:
ocd01002
]
Metallo peptidases
Family M20
FHY55_00245 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QDC07768
UniProt:
A0A5B8BPJ2
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Position
45807..46955
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AA seq
382 aa
AA seq
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MTTDPVELTRALVQCPSVTPEEGGALVLLEDRLSAAGFACTRVDRGGVSNLFARWGRAGN
GKSFGFNGHTDVVPVGDEAAWTFPPFGAQEDDGWLYGRGATDMKSGVAAFVAAAIDFVQD
TPPEGSVVLAITGDEEGDALDGTTALLDWMAENGERMDVCIVGEPTSLEEMGDMMKIGRR
GSMNAHYVLRGKQGHSAYPHRAINPVAAMARLCDRLASRELDMGTEHFDASTLALTTIDV
GNVATNVIPAQARATANIRFNDEHTGEGLTEWLKAEGDRVAEEFGVEVDLTVKVSGEAFL
TPPGELSALVSGAVEAVTGRAPEPSTTGGTSDARFVKSHCPVVEFGLVGHRMHQVDERVR
VEQIGQLKEVYGQMLAAYFAEA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaccccgtagagctgacccgcgcactcgtgcagtgcccttctgtgacaccc
gaggagggcggagcgctggtgctgctggaagaccggctttcggcagccggtttcgcctgc
acccgagtggatcgcggcggcgtatccaacctgtttgcccgctggggccgcgcgggcaac
ggcaagtccttcggcttcaacggccacacggatgtggtgccggtgggcgatgaggccgcg
tggacctttccgcccttcggcgcacaggaggatgatggctggctctatggtcggggggcg
accgacatgaaaagcggtgtggccgctttcgtggccgcggccatcgactttgtgcaggat
accccgccggagggctcggtggttttagcgattaccggtgacgaggagggcgatgcgctg
gatggcaccaccgcgctgctggactggatggccgagaatggcgagcggatggatgtgtgc
atcgtcggtgagccgacctcgctcgaagagatgggcgacatgatgaagatcgggcgacgc
ggctcgatgaacgcccattacgtgctgcgcggcaaacagggccacagcgcctatccgcat
cgcgccatcaacccggtggccgcgatggctcggctctgcgacaggctcgccagccgcgag
ctcgacatgggcaccgagcattttgacgcctccacgctggcgctcaccaccatcgacgtg
ggcaatgtggcgaccaacgtgatcccggcgcaggcgcgggccacggcgaacatccggttt
aatgatgagcacaccggtgagggcctgaccgagtggctgaaggccgagggagaccgggtg
gccgaggagtttggcgtagaggtcgacctgacggtgaaggtgagcggcgaggccttcctg
accccgccgggtgaactttcggcgctggtgagcggagcggtggaggcggtgacgggccgc
gcgccggaacccagcaccacgggcgggacgagcgatgcgcgtttcgtaaaaagccattgc
ccagtggtggaattcggccttgtcgggcaccggatgcatcaggtggatgagcgggtgcga
gtcgagcagattggccagttgaaagaggtgtatggccagatgctggcggcctatttcgcc
gaggcgtga
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