Oceanimonas sp. GK1: GU3_08460
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Entry
GU3_08460 CDS
T01667
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00300
Lysine biosynthesis
oce01100
Metabolic pathways
oce01120
Microbial metabolism in diverse environments
oce01230
Biosynthesis of amino acids
Module
oce_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GU3_08460
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oce01002
]
GU3_08460
Enzymes [BR:
oce01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GU3_08460
Peptidases and inhibitors [BR:
oce01002
]
Metallo peptidases
Family M20
GU3_08460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AEY01448
UniProt:
H2FU81
LinkDB
All DBs
Position
complement(1845202..1846335)
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AA seq
377 aa
AA seq
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MTDSAVLALTRELINRPSVTPEDEGCQELMGERLAALGFKLETMVFEDTTNLWARRGTEG
PLFCFAGHTDVVPPGPLDKWHTPPFEATDIDGYLHGRGAADMKGSLAAMVVATERFVARF
PDHKGSIAFLITSDEEGPFINGTTRVVDTLEARNEKITWCLVGEPSSTHEVGDVVKNGRR
GSLTGDLTVKGVQGHVAYPHLADNPVHKAAPALAELAATTWDKGNDYFPPTSFQIANIHA
GTGASNVIPGDMQVQFNFRFSTELDEDKIKARVHSVLDAHGLDYDLSWLLNGKPFLTDSG
DLVAATVDAVKAVRHQEPALLTTGGTSDGRFIAQTGAQVIELGPVNATIHKLNECVKIAD
LEQLTDMYEGILERLLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactctgccgtgctggctctcaccagggaactgatcaaccgtccctcggtaacc
cccgaagacgaaggctgccaggagctgatgggcgagcggctggccgccctgggtttcaaa
ctggaaaccatggtgtttgaagataccaccaacctctgggcccgccgcggcaccgagggg
ccgctgttctgctttgccggccacaccgacgtggtcccgcccggccccctggataaatgg
cacacaccgccctttgaggccaccgacatcgacggctacctgcacggtcgcggcgccgcc
gacatgaaaggatcgctcgccgccatggtggtggccaccgaacgctttgtggcccgtttt
cccgaccataaaggctccatcgcctttctgatcaccagcgacgaagaaggcccctttatc
aacggcaccacccgggtggtggacaccctggaagcccgcaatgaaaaaatcacctggtgc
ctggtgggcgagccgtcatccacccacgaagtgggcgacgtggtcaagaacggccgccgc
ggctccctcaccggtgacctgaccgtgaaaggcgtacagggccatgtggcctatccgcac
ctggccgacaacccggtgcacaaggccgccccggcgctggccgagctggccgccaccacc
tgggacaagggcaacgactattttccgcctaccagctttcagatcgccaatattcacgcc
ggcaccggcgcctccaacgtgattccgggcgacatgcaggtgcagttcaacttccgcttc
agcaccgagctggacgaagacaagatcaaggcccgggtgcacagcgtgctcgacgcccat
ggcctcgactacgatctcagctggctgttgaacggcaagccctttcttaccgacagcggc
gatctggttgcggccaccgtggacgccgtcaaggcggtgcgtcaccaggagccggccctg
ctcaccaccggcggcacctccgacggccgctttatcgcccagaccggcgcccaggtgatt
gagctgggcccggtcaacgccaccattcacaagctcaacgaatgcgtgaaaatcgccgat
ctggaacagctcaccgacatgtacgaaggcattctggagcggttgctggcatga
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