Afipia carboxidovorans OM5 (Goettingen): OCA5_c02360
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Entry
OCA5_c02360 CDS
T01617
Symbol
lcfB1
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00280
Valine, leucine and isoleucine degradation
ocg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OCA5_c02360 (lcfB1)
Enzymes [BR:
ocg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
OCA5_c02360 (lcfB1)
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEI04965
UniProt:
F8BST8
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Position
complement(251984..253531)
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AA seq
515 aa
AA seq
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MTTPAKPTPANANLYARLFNDMKEPLKTAIEPDGGTPISYRELDAQAARYANYLTACGVK
TGDRVAVQVEKSTAAVMLYLATVRAGAIFLPLNTAYTLNELDYFFGDAEPALIVCDPSKA
EGIAKIAQPIGARVETLDSEGRGSLADGATKSADSFTTVQREGSDLAAILYTSGTTGRSK
GAMLTHDNLASNSLSLVEIWHFTDKDVLIHALPIYHTHGLFVAINVCLFSGATMIFLKKL
DTDRIIDLMPRSTVLMGVPTFYVRLLQNPRLTKEAASHMRLFISGSAPLLAETHREWSAR
TGHAVLERYGMTETNMSTSNPYDGDRVPGAVGFPLPGVTMRVTDPETGRELARDEIGMLE
VKGPNVFKGYWRMPEKTKTEFREDGFFITGDLGKIDPRGYVHIIGRGKDLVISGGFNVYP
KEIESEIDAIPGVVESAVIGVPHADFGEGVTAVVVPDKTAKLDEAAILHALDGRLAKFKL
PKRVLFINELPRNTMGKVQKNILRDTYATLYTGAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcccgccaagccaacgcccgccaacgccaatctctacgcccgcctgttcaac
gatatgaaggagccgctcaagacggcgatcgagcccgatggcggcacgccgatcagctat
cgcgaactcgacgcgcaggcggcgcgctatgcgaattatctcacggcctgcggcgtcaag
accggcgatcgtgtcgcggtacaggtggagaaatcaaccgccgcggtgatgctctatctc
gcgaccgtgcgcgcgggcgcgatcttcctcccgctcaacaccgcctacacgctcaacgag
ctcgactactttttcggcgacgccgaaccggcgctgatcgtctgcgacccgtccaaggcg
gaaggcatcgccaagatcgcgcagccgatcggtgcgcgcgtcgagacgctcgacagcgaa
ggccgcggttcgctcgcagacggcgccaccaaaagcgccgacagtttcacaaccgtccag
cgcgagggctcggatctcgccgcgatcctctatacctcgggcaccaccggtcgctcgaag
ggcgcgatgctgacccacgacaacctcgcgtccaactcgctgtcgctggtcgagatctgg
cacttcaccgacaaggatgtgctgatccacgcgctgccgatctatcacacccacgggctg
ttcgtggcgatcaacgtctgcctgttctccggcgccacgatgatcttcctgaagaagctc
gacaccgaccgcatcatcgatctgatgccgcgttcgaccgtgctgatgggcgtgccgact
ttctacgtccggctgctgcagaacccgcgactgacgaaagaagcggcctcgcacatgcgg
ctgttcatttccggctccgcgccgcttctcgccgagacgcatcgtgagtggtcggcccgt
accggccacgccgtgctcgagcgttacggcatgaccgaaaccaacatgagcacgtcgaac
ccctacgatggcgatcgcgtgcccggcgcggtcggcttcccgttgcccggtgtcaccatg
cgcgtgaccgaccccgagaccggacgcgaactcgcccgcgacgagatcggcatgctggaa
gtcaaaggcccgaacgtgttcaagggctactggcggatgccggagaaaaccaagaccgaa
ttccgcgaggatggcttcttcatcaccggcgacctcggcaagatcgatccgcgcggctac
gttcacatcatcggccgcggcaaggacctcgtcatttcgggcggcttcaacgtctatccg
aaagagatcgagagcgagatcgacgccattcccggcgttgtcgaaagcgcggtgatcggc
gtgccgcatgccgatttcggcgaaggcgtgaccgccgtcgtggtgccggacaagacggcg
aagctcgacgaagccgccatcctgcacgcgctcgacgggcggcttgcgaagttcaagctg
ccgaagcgcgtgctgttcatcaatgaactgccgcgcaacaccatgggcaaggtgcagaag
aacattctgcgcgacacctacgccacgctctacaccggcgcgaaatag
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