Afipia carboxidovorans OM5 (Goettingen): OCA5_c05840
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Entry
OCA5_c05840 CDS
T01617
Symbol
garD
Name
(GenBank) D-galactarate dehydratase GarD
KO
K16846
(2R)-sulfolactate sulfo-lyase subunit beta [EC:
4.4.1.24
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00270
Cysteine and methionine metabolism
ocg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OCA5_c05840 (garD)
Enzymes [BR:
ocg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.24 (2R)-sulfolactate sulfo-lyase
OCA5_c05840 (garD)
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Motif
Pfam:
GD_AH_C
GD_AH_second
Motif
Other DBs
NCBI-ProteinID:
AEI05308
UniProt:
B6JJR4
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All DBs
Position
610014..611195
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AA seq
393 aa
AA seq
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MASKYSNLTFKGYRRENGRVGVRNHVLILPVDDISNAACEAVANNIKGTLAIPHAYGRLQ
FGEDLELHFRTIIGTGANPNVAACVVIGIEPGWTKRVADGIAATGKPVASFSIEQNGDLK
TIMNASRAAKDFVQHATELQREECSVSELWVSTKCGESDTTTGLGSCPTVGNMYDKLLPE
GIYGCFGETSEITGAEHICKTRAATPEVGERWHKMWKAYSDDVIFKNQTDDLSESQPTKG
NIEGGLSTIEEKALGNLEKIGRTSRYIDILEPAEAPKSGKGLYFMDSSSAAAECVTLMAA
GGYVVHTFPTGQGNVIGNPIVPVIKITANPRTLRTMSEHIDVDVTGILRREMTIDQAGDA
LIDMIMRTASGRNTAAEALGHREFSMTKLYRSA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaatattccaacctcaccttcaagggatatcgccgcgagaacggccgcgtc
ggcgtccgcaatcatgtccttatccttccggtggacgatatttccaacgctgcctgtgag
gcggtcgccaacaacatcaagggcacgctcgcgattccgcacgcctacgggcggttgcag
ttcggcgaagaccttgaattgcacttccgcaccatcatcggcaccggcgccaacccgaac
gtcgcggcctgcgtcgtgatcggcatcgagcccggctggaccaagcgcgtggccgatggc
atcgccgccaccggcaagccggttgcgagcttctcgatcgagcagaacggcgatctcaag
accatcatgaacgcttcgcgcgccgcgaaggatttcgttcagcacgcgaccgaactgcag
cgcgaggaatgctcggtctccgagctgtgggtctcgaccaagtgcggcgagagcgacacc
accaccggtcttggctcctgcccgactgtcggcaacatgtacgacaagctgcttcccgaa
ggcatctacggctgcttcggcgagacttcggagatcaccggcgcggagcacatctgcaag
acgcgcgcggcgacgccggaagtcggcgagcgctggcacaagatgtggaaggcctattcc
gacgacgtgatcttcaagaaccagaccgacgacctgtcggaaagccagccgaccaagggc
aacatcgagggtggtctttccaccatcgaggagaaggctctcggcaacctcgagaagatc
ggccgcacctcgcgctacatcgacattctcgagccggccgaggcgccgaagtcgggcaag
ggtctttacttcatggactcctcgtcggccgcggccgagtgcgtcaccctgatggctgcg
ggcggctatgtcgtccacaccttcccgaccggccagggcaacgtgatcggcaacccgatc
gtgccggtgatcaagatcaccgccaacccgcgcacgctccgcaccatgagcgagcatatc
gacgtcgacgtcaccggcatcctccgccgcgagatgaccatcgaccaggcgggcgatgcg
ctgatcgacatgatcatgcggaccgcgagcggccgcaatactgcggcggaagcgctcggc
catcgtgagttctcgatgacgaagctctatcgcagcgcctga
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