Afipia carboxidovorans OM5 (Goettingen): OCA5_c17800
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Entry
OCA5_c17800 CDS
T01617
Name
(GenBank) putative squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00906
Carotenoid biosynthesis
ocg01100
Metabolic pathways
ocg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
OCA5_c17800
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ocg01006
]
OCA5_c17800
Enzymes [BR:
ocg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
OCA5_c17800
Prenyltransferases [BR:
ocg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
OCA5_c17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AEI06494
UniProt:
B6JFN0
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All DBs
Position
1926153..1927019
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AA seq
288 aa
AA seq
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MSESHSKAADNAAYCAQLVRDHDFERYATTLFVSQHLRRPLLALAAFNVELSRIRDHVSQ
PLTGEIRLQWWRDLIDDVARGSVEASPVAAELMAAVAEYDLPRRDLSRLADARVFDLYDD
PMPSLAVFERYCDDTAGRLFALSAQILGAAPDAVADAVHHAGVAQGIAEAIENLSLHAAR
KQLYLPQDVLAEAGAMEADIFAGRPTPQLTAAIGGLAVVAREHLGKALFLLREQKGEAAR
AFLPLAVVRRALSHDSLATGNPFTPQSISRLRMLWTMWRVTKSEAFRG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagtcacagcaaggccgccgacaacgccgcctattgcgcgcagcttgtgcgc
gaccacgatttcgagcgctatgctacgacgctgttcgtctcacagcatctgcggcgaccg
ctgcttgcacttgctgctttcaatgtcgaactgagccgtatccgcgatcacgtcagccag
ccgttgaccggcgaaatccgcctgcaatggtggcgcgatctgatcgacgatgtcgcgcgc
ggcagtgtcgaggcgagccccgttgctgccgagctgatggccgcagtggcagaatacgat
ctgccgcgtcgcgatctttcgcggctcgccgatgcgcgggtgttcgatctctatgacgat
ccgatgccgtcgctcgcggtgttcgagcgctattgcgacgatactgcgggacggctgttt
gcattgagcgcgcaaattctcggcgcggcgccagacgccgtcgcagacgccgtgcatcat
gcgggtgttgcgcaagggattgcagaggcgattgaaaatctgtcgctccatgctgcgcgc
aagcagctttatctaccgcaggacgtgctggccgaagcgggcgcgatggaggccgatatc
tttgccgggcgccccacgccgcaactgacagcggcgatcggcggccttgccgttgtcgcg
cgcgagcatcttggcaaggcgctgttcttgctgcgcgagcagaaaggcgaggcagcgcgt
gcttttctgccgctcgccgtcgtgcggcgggcgttgagccacgacagcctcgccaccggc
aatccattcacgccgcaatcgatatcgcggctgcggatgctgtggacgatgtggcgcgtg
acaaaatcggaagcgtttcgggggtaa
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