Ochrobactrum quorumnocens: CES85_0138
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Entry
CES85_0138 CDS
T05040
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
och
Ochrobactrum quorumnocens
Pathway
och03030
DNA replication
och03410
Base excision repair
och03420
Nucleotide excision repair
och03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
och00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CES85_0138 (polA)
03410 Base excision repair
CES85_0138 (polA)
03420 Nucleotide excision repair
CES85_0138 (polA)
03440 Homologous recombination
CES85_0138 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
och03032
]
CES85_0138 (polA)
03400 DNA repair and recombination proteins [BR:
och03400
]
CES85_0138 (polA)
Enzymes [BR:
och01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CES85_0138 (polA)
DNA replication proteins [BR:
och03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CES85_0138 (polA)
DNA repair and recombination proteins [BR:
och03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CES85_0138 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CES85_0138 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
ZapD
HHH_2
DprA_N
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
ASV86329
UniProt:
A0A248UJ85
LinkDB
All DBs
Position
1:140699..143632
Genome browser
AA seq
977 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKTDGLPVGAVSGFCNMLWKLLKDARSTDVGVV
PTHFAVIFDYSSQTFRKEIYPEYKANRTAPPEDLIPQFGLIRQATRAFNLPCIEKEGFEA
DDLIATYARLAENAGGDVTIISSDKDLMQLVTPQVSMYDSMKDKQISIPEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGIPGIGPKTAAQLLEEFGDLDTLLARASEIKQNKRRENIIAFS
DQTKIARELVTLKTDVPLEVDLDGLVLEPQNGPKLIGFLKALDFTTLTRRVAEATDTDAS
AVEPCHIETEWGADAHGPDVDVPAKSAAASSEVSVASEVSDVSGYTPKALAESRAATALA
QKIDTTAYTCIRDLPTLNKWLAEAVETGLVAFDTETNSLDPMQAELIGFSLALAPGKAAY
IPLQHKSGMGDLLGGGMVEGQIPLGAALDALKTVLEDKSVLKIAQNMKYDWLVMRRHGIN
TASFDDTMLISYVLDAGTGGHGMDPLSERWLGHTPIAYKDVAGSGKSSVTFDMVDIDRAT
AYAAEDADVTLRLWQVLKPRLAAEGLASVYERLERPLVDVLARMEERGISVDRQVLSRLS
GDLAQSAAAYEDEIYELAGEKFNIGSPKQLGDILFGKMGLPGASKTKTGQWSTSAQVLED
LAAEGLPLPRKIVDWRQLTKLKSTYTDALPGFIHPQTKRVHTSYAMASTSTGRLSSSEPN
LQNIPVRTAEGRKIRTAFVAEPGNKLISADYSQIELRVLAHVADIPQLKQAFADGIDIHA
MTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIAREEAGQYIRTYFERF
PGIKDYMEATKAFAREHGYVETIFGRRAHYPDIRASNPQVRAFNERAAINAPIQGSAADV
IRRAMIRMEKTLNEEKLAARMLLQVHDELIFEVPESEVEKTIPVVRHVMENAAMPAVPLS
VPLQVDARAAHNWDEAH
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgttgacggctcgggctatattttccgtgcctat
catgccctgccaccgctgacgcgtaagacggacggcttgcctgttggggccgtatctggt
ttctgcaacatgctgtggaagctgttgaaggatgcgcgcagcaccgatgttggtgtggtg
ccgacgcattttgcggtcattttcgattactcgtcgcagactttccgcaaagagatttat
cccgagtataaggcaaaccgcaccgcgccgccggaagatctcattccgcaattcggcctg
atccgtcaggcaacgcgtgcattcaatctgccttgcatcgaaaaggaaggttttgaggcc
gacgacctgatcgcaacctatgcccgtctggctgaaaatgcaggcggcgatgttacaatc
atttcgtccgataaagatctcatgcagctcgtgacgccacaggtgtccatgtatgacagc
atgaaggacaagcagatttcgatcccggaagtgattgaaaaatggggcgtgccgcctgaa
aagatgatcgatctgcaatcgctgactggcgatagcaccgataatgtaccgggaattcca
ggcattggcccgaagaccgctgcgcaattgctggaagagtttggcgatcttgatacgctg
ctcgcacgcgcttctgagatcaagcagaacaaacgtcgtgaaaatatcatcgctttttct
gaccagacaaaaatcgcgcgggagctcgtaacgcttaaaacagacgtgccgctcgaagtt
gatctcgacggtctggtgcttgagccacagaatggcccaaagctcattggctttttgaaa
gcgctggatttcacaacgctgacccgtcgcgtggccgaagcaaccgacactgatgcgtcg
gcggttgagccatgtcatatcgaaacggaatggggtgcagatgcacacggtcccgatgtc
gatgtgccagcaaaatcagcggccgcttcgtccgaagtttctgttgcctccgaagtgtct
gacgtcagtggctacacgccgaaagcattggcggaaagccgtgctgcaacggcacttgcg
cagaaaatcgacaccacggcctatacctgcattcgcgatcttccgacgctgaacaagtgg
ctcgcggaagctgttgagaccggtcttgttgcattcgatacagaaaccaattcgcttgat
ccgatgcaggcagaattgatcggtttctcgctggcacttgcaccgggcaaggcagcttat
attccgctccagcacaaatccggcatgggtgatcttcttggcggaggcatggtcgagggg
cagattccactaggggcggcgctcgacgccttgaagaccgttcttgaggacaagtctgtt
ctcaagatcgcacaaaacatgaaatatgactggctcgtcatgcgccgtcacggcatcaac
accgcgtccttcgatgacacgatgctgatttcctatgtgcttgatgcaggcaccggcgga
cacggcatggacccgctttccgaacgctggcttggccatacaccgatcgcctataaggat
gtagcgggcagcggcaaaagctctgtaacctttgatatggtcgatatcgatcgcgcaacg
gcttacgcagccgaagatgcagacgtaacgctgcgcctctggcaggtgctgaaaccacgt
ctggccgcagaaggattggcgtcggtttatgagcgtcttgaacgtccgctggtcgatgtg
ctggcacggatggaagaacgcggtatttctgttgaccgacaggttctttcgcgcctttcg
ggcgatctcgcacagtcagcggccgcctatgaagatgaaatctatgaattggctggggaa
aaattcaacatcggctcgcccaagcagcttggcgatattctgtttggcaaaatgggtctg
ccgggcgcgtccaagaccaaaactggacaatggtcgacctctgcacaggtgctggaagat
cttgccgctgaaggcctacctctgccgcgtaagattgttgactggcgtcagctgaccaag
cttaaatccacttatacggatgcgctgccgggctttattcacccgcagaccaagcgcgtt
cacacctcttatgcgatggcatcgacctcgacagggcgtttgtcttcatctgaaccaaac
ttgcagaatattccggttcgtacagccgaaggccgcaagatcaggacggcattcgttgct
gaacccggcaacaagctgatttctgctgattacagtcagatcgaattacgcgtactggct
catgtcgccgatattccgcagttgaaacaggcttttgctgatggcatcgacattcatgcc
atgacagcatcagaaatgtttggtgtgccggtcgaaggtatgccttcggaagtgcgtcgc
cgcgccaaggcgatcaacttcggtattatctacggcatttcggcctttggccttgccaac
cagctttccattgcgcgtgaagaagctggccaatatatccgaacctatttcgagcgtttc
cccggtatcaaggactatatggaagcgaccaaggcgtttgcgcgcgaacatggctatgtc
gaaacgattttcgggcgtcgggcgcactacccggatattcgtgcttccaacccgcaagtg
agggcgttcaacgaacgtgcggcaatcaatgcgcctattcagggttccgcagccgatgtc
attcgccgtgccatgattcgcatggagaagacgctgaacgaagaaaagcttgcagcacgt
atgctattgcaagtgcacgatgaattgatcttcgaagtgcctgaaagcgaggtcgaaaag
acaatccctgtcgttcgtcatgtgatggagaacgcggccatgcctgcagtgccgctttct
gtgccgttacaggtcgatgcgcgtgcagcgcataactgggatgaggcgcattga
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