Oceanobacillus zhaokaii: CUC15_17655
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Entry
CUC15_17655 CDS
T05570
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ocn
Oceanobacillus zhaokaii
Pathway
ocn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CUC15_17655 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocn03021
]
CUC15_17655 (rpoE)
03400 DNA repair and recombination proteins [BR:
ocn03400
]
CUC15_17655 (rpoE)
Transcription machinery [BR:
ocn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CUC15_17655 (rpoE)
DNA repair and recombination proteins [BR:
ocn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CUC15_17655 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
AXI10653
UniProt:
A0A345PKX3
LinkDB
All DBs
Position
complement(3609347..3609844)
Genome browser
AA seq
165 aa
AA seq
DB search
MSLKDLSHEEIKGMSLIELTGLILKDEKKALHFNEIFDRISELREFSKKDKEKKIAQFYT
DMNIDGRFTTIGSNMWGLRSWYPVEQQDEEVHAPVKKKKTSAKKKKTPIEKDVAFDDELG
ELEDEDDLDLDDEIIDDEDLDVEDEDLDNFIEDFDDEEMEEDEEL
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttaaaagatcttagccacgaggaaataaaaggaatgtcattaatagaattaact
gggttgattttaaaagatgaaaaaaaagccctgcattttaatgaaattttcgatagaatt
tccgagttgagagagttttcgaaaaaagataaggaaaagaaaatagctcaattctacaca
gatatgaatattgatggtcgctttacgacaatcggttcaaatatgtggggattaagaagc
tggtatcctgtagaacaacaagatgaagaagtacatgctccggtgaaaaagaagaagaca
tctgcgaagaagaagaaaactccaattgaaaaagatgttgcctttgatgacgagcttggt
gaattggaagatgaggacgatttagacttagacgacgagattatcgatgatgaggatcta
gatgttgaagatgaagatctagataatttcatcgaggatttcgatgatgaagaaatggaa
gaagacgaagaattataa
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