Afipia carboxidovorans OM4: OCA4_c17480
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Entry
OCA4_c17480 CDS
T01967
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00010
Glycolysis / Gluconeogenesis
oco00020
Citrate cycle (TCA cycle)
oco00620
Pyruvate metabolism
oco00785
Lipoic acid metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
oco01210
2-Oxocarboxylic acid metabolism
Module
oco_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OCA4_c17480 (pdhB)
00020 Citrate cycle (TCA cycle)
OCA4_c17480 (pdhB)
00620 Pyruvate metabolism
OCA4_c17480 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OCA4_c17480 (pdhB)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
OCA4_c17480 (pdhB)
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
SAP130_C
Motif
Other DBs
NCBI-ProteinID:
AEI02886
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Position
1894556..1895959
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AA seq
467 aa
AA seq
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MPIQVLMPALSPTMEKGNLAKWLKKEGDAIRSGDVIAEIETDKATMEVEATDEGTLGKIL
VPEGTADVAVNTPIATILADGESAADLDKAAAPAAQPKAAESAPPAAAPAAVPVPASKAE
AVPAAPASQAAPDPDIPPGTEMVTMTVRDALRDAIAEEMRRDEDVFIMGEEVAEYQGAYK
ITQGILQEFSARRVIDTPITEHGFAGVGIGAAMAGLKPIVEFMTFNFAMQAMDQIINSAA
KTLYMSGGQMGCSIVFRGPNGSAARVAAQHSQDYAAWYSQIPGLKVIAPYTAADAKGLLK
AAIRDPNPVIFLEHEILYGHSFEVPKLDDYVLPIGKARIARTGQHVTLISWSHAMTWTLK
AAEELAKEGIEAEVIDLRTIRPMDTETLIASVQKTGRAVVIEEGWQQSGVGSEVAARLME
HAFDYLDAPVARVSGKDVPMPYAANLEKLALPSVEDVVAAAKAVSYR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcaagtattgatgcccgcgctctcgcccacgatggaaaagggcaaccttgcc
aagtggctgaagaaggaaggcgatgccatcaggtccggcgacgtcatcgccgagatcgag
accgacaaggcgacgatggaagtcgaggcgaccgacgaaggcaccctcggcaagattctg
gtgccggaaggcaccgccgatgttgccgtgaacacgccgatcgcaaccatccttgctgac
ggcgaaagcgccgccgacctcgacaaggcggctgcaccggcagcccagccgaaagccgcc
gaatccgcgccgcccgccgctgcgccggctgcagtccccgtgcccgcatcgaaggctgaa
gcggtccccgctgcgcccgccagtcaggcagcgcccgatcccgatattccgcccggtacc
gagatggtgacgatgacggtgcgcgatgcgttgcgcgacgccatcgccgaagagatgcgc
cgcgatgaagacgtcttcatcatgggcgaggaggtcgccgagtatcagggcgcctacaag
atcacccagggcatcctgcaggaattctccgcgcgccgcgtaatcgacacgccgatcacc
gagcatggcttcgcgggcgtcggcatcggcgcggcaatggcgggcctgaagccgatcgtc
gagttcatgacgttcaacttcgccatgcaggcgatggaccagatcatcaactccgccgcc
aagacgctctatatgtccggcgggcagatgggctgttcgatcgtcttccgcggcccgaac
ggttcggccgcgcgcgtcgccgcccagcacagccaggattatgcggcgtggtactcgcag
atcccgggcctcaaggtgattgcgccttacaccgcggccgacgccaaggggcttctgaaa
gcggcgattcgcgatccgaacccggtgatcttcctcgagcacgaaattctctacggccac
agcttcgaagtgccgaagctcgacgattatgtgctgccgatcggcaaggcgcgcatcgcc
cgcaccggtcagcatgtcacgctgatctcgtggtcgcatgccatgacgtggacgctgaag
gccgccgaagaactcgccaaggaaggcatcgaggccgaggtgatcgacctgcgcaccatc
cggccgatggacaccgaaacgcttatcgcttcggtgcagaagaccggccgcgccgtcgtc
atcgaggaaggctggcagcagtcgggcgtcggctccgaggtcgccgcgcggttgatggag
catgcgttcgattatcttgatgcgccggttgcgcgcgtctcgggcaaggacgtgccgatg
ccgtatgcggccaacctcgaaaagcttgcgctgccgtctgtcgaggacgttgtcgccgcc
gccaaagcggtcagctatcggtga
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