Afipia carboxidovorans OM4: OCA4_c20500
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Entry
OCA4_c20500 CDS
T01967
Symbol
glnS
Name
(GenBank) glutamine-tRNA ligase GlnS
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00970
Aminoacyl-tRNA biosynthesis
oco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA4_c20500 (glnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oco01007
]
OCA4_c20500 (glnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c20500 (glnS)
Enzymes [BR:
oco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
OCA4_c20500 (glnS)
Amino acid related enzymes [BR:
oco01007
]
Aminoacyl-tRNA synthetase
Class I (A)
OCA4_c20500 (glnS)
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OCA4_c20500 (glnS)
Prokaryotic type
Other AARSs
OCA4_c20500 (glnS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Helicase_IV_N
Motif
Other DBs
NCBI-ProteinID:
AEI03181
LinkDB
All DBs
Position
complement(2230932..2232608)
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AA seq
558 aa
AA seq
DB search
MTDESTPDVGRDFIRDIVAADLESGKHKGVVTRFPPEPNGYLHLGHAKSICLNFGIAEEF
GGRCHLRFDDTNPAKEEQEFIDAIQRDVRWLGFDWGEHLHFASDYFEQLYAWAQELIRAG
KAYVDDQSAEEIRLTRGTLTEPGQNSPFRDRSVAENLDLFARMRAGEFPDGTRVLRAKID
MSSGNINLRDPVLYRILHAHHPRTGKAWSIYPSYDFAHGQSDSIEHITHSICTLEFEDHR
PLYDWFLDNLPVPSHPRQYEFARLNMTYTLLSKRVLTGLVREGHVSGWDDPRMPTLAGLQ
RRGVPAEALRDFVKRIGVAKANSTVDIGMFDFAVRETLNRTAPRRMAVLRPLKVVIENYP
EGEVEELEAINHPDDPAQGTRKIPFGRELYIEQDDFMEEPPKKFFRLAPGREVRLRYAYF
ITCREVIKNAAGEVVELRCTYDPATRGGNAPDGRKVKATIHWVSAAHAVSAEVRLYDNLF
ATPQPEPGNFAAQLNPNSLEILTDSKVEPAFKNDAAIGAVQFERQGYFVRDRDSTPERLV
FNRTVGLRDSYAKVAAAG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaatcgacgccggacgtgggccgcgacttcatccgcgatattgtggcggcg
gacctggaatccgggaagcacaagggcgtcgtgacgcgctttccgccggagcccaacggc
tacctgcatctcggccatgccaagtcgatctgcctgaatttcggcatcgccgaggagttc
ggcgggcgctgccatctgcgcttcgacgacaccaacccggccaaggaagagcaggaattc
atcgacgccatccagcgcgatgtccgctggctcggcttcgactggggcgagcacctgcat
ttcgcgtccgactatttcgagcagctttacgcttgggcgcaggagctgatccgcgccggc
aaggcctatgtcgacgaccagtcggcggaggagatccggctgactcgcggcaccctgacc
gagccgggacagaacagcccgttccgcgaccgctccgtggcagagaacctcgacctgttt
gcgcggatgcgtgcaggcgaattcccggacggcacccgcgtgctgcgcgccaagatcgac
atgagctcgggcaacatcaacctgcgcgatccagtgctctaccgcatcctgcatgcgcac
catccgcgcaccggcaaggcgtggagtatctatccgagctacgacttcgcgcacggccag
tcggactcaatcgagcacatcacgcattcgatctgcacgctggagttcgaggatcaccgg
ccgctctacgactggttcctcgacaatctcccggtgccatcgcatccgcgccagtacgaa
ttcgcgcggctcaacatgacctacacgctgctgtcgaagcgcgtgctcaccggtctggtc
cgcgaggggcacgtctccggctgggacgacccgcgcatgccgacgctcgcgggcctgcag
cggcgcggcgtcccggcagaggcgctgcgtgatttcgtcaaacgcatcggcgtcgccaag
gcgaactcgaccgtcgatatcggcatgttcgatttcgcggttcgcgagacgctgaaccgc
accgcgccgcgccgtatggcggtgctgcgaccgctgaaggtggtgatcgagaattatccg
gaaggcgaggtcgaggagctcgaggcgatcaaccatcctgacgatccagcacagggtacg
cgcaagattccgttcggtcgcgaactctacatcgagcaggacgacttcatggaggagccg
ccgaagaagttcttccgcctcgcgccggggcgcgaggtgcggctgcgctacgcctatttc
atcacctgccgcgaggtgatcaagaacgcggcgggcgaggtggtcgaactgcgctgcacg
tatgatccggcgacacggggcggcaatgcgccggacggccgcaaggtgaaggcgaccatt
cattgggtcagcgcggcgcacgcggtgtcggcggaagtgcggctctacgacaatctgttc
gccacgccgcagccggagccgggcaatttcgccgcgcagctcaatccgaactcgcttgag
attctgacggacagtaaggtcgagcccgcgttcaagaacgatgcagcgattggcgcggtg
cagttcgagcggcagggctatttcgtccgtgatcgcgactcgacgccggagcggctggtg
ttcaatcgcaccgtcggcctgcgcgacagctacgccaaggtcgccgcggcaggataa
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