Afipia carboxidovorans OM4: OCA4_c29860
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Entry
OCA4_c29860 CDS
T01967
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase Ldc
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00330
Arginine and proline metabolism
oco00480
Glutathione metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
OCA4_c29860 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
OCA4_c29860 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
OCA4_c29860 (ldc)
Enzymes [BR:
oco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
OCA4_c29860 (ldc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEI04092
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All DBs
Position
3178025..3179260
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AA seq
411 aa
AA seq
DB search
MVASPSCDMAGFPGSEIISLSGSSQGRWESAMTDRIQEFLRDRRSKGLDTEPCLVVDLDV
VRDNYQTFAKALPDSRVFYAVKANPAPEVLTLLASLGSCFDTATVPEIEMALAAGATPDR
ISFGNTIKKERDVARAYALGIRLFAVDCTAEVEKIARAAPGAKVFCRILYDCAGAEWPLS
RKFGCDPEMAVDVLDLAKRLGLEPVGISFHVGSQQRKVKAWDRALAMASQVFRDCAERGI
NLTMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIEPGRGMVGNAGVIE
AEVVLISKKSDDDENRWVYLDIGKFGGLAETMGESIRYQIRTRHDGAEMAPCVLAGPTCD
SADVLYEKAPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNGIPPLRTYHI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgtctccatcgtgcgacatggcaggctttcctggctcggagatcatttcgttg
agcggctcgtcgcagggccgttgggagagtgcgatgaccgatcgtatccaggaatttctg
cgcgaccgccgcagcaagggcctcgacaccgagccgtgcctcgtcgtcgacctcgatgtc
gtgcgcgacaactaccagaccttcgcgaaggctctgcccgacagccgcgtgttctacgcg
gtgaaggcaaacccggcgccggaagtgctgacgctgctcgcctcgctcggctcgtgcttc
gacaccgcgaccgtgcccgagatcgagatggcgctggccgccggcgcgacccccgatcgc
atctccttcggcaacaccatcaagaaggagcgcgacgtcgcgcgcgcctacgcgctcggc
attcgcctgttcgcggtcgactgcaccgccgaggtcgagaagatcgcccgcgccgccccc
ggcgcgaaggtgttctgccgcatcctctacgactgcgccggcgccgagtggccgctgtcg
cgcaagttcggctgcgacccggaaatggcggtcgacgtgctcgacctcgccaagcgtctt
ggcctcgagccggtcggcatctcgttccatgtcggctcgcagcagcgcaaggtgaaggcg
tgggaccgagcgcttgcgatggcctcgcaggtcttccgtgactgcgccgagcgcgggatc
aacctcaccatggtcaacatgggcggcggcttcccgaccaagtacctgaaggacgttccg
ccggtcgtgcagtacggccggtcgatcttccgtgcgctgcgcaagcacttcggcaaccag
atcccggaaacgatcatcgagccgggccgcggcatggtcggcaacgcaggtgtgatcgag
gcggaagtcgttctgatctcgaagaagagcgacgacgacgagaaccgctgggtctatctc
gacatcggcaagttcggcggcctcgccgagacgatgggcgaatcgatccgctaccagatc
cgcacccggcatgacggcgcggagatggcgccttgcgtgctcgccggtccgacctgcgat
tcggccgacgtgctctacgagaaggcgccgtatccgctgccggtgacgctcgagatcggc
gacaaggtgctgatcgagggcaccggcgcctatacgtcgacctactcgtcggtggcgttc
aacggcattccgccgctgaggacgtaccacatctga
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