Afipia carboxidovorans OM4: OCA4_c32730
Help
Entry
OCA4_c32730 CDS
T01967
Symbol
rfbC1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00521
Streptomycin biosynthesis
oco00523
Polyketide sugar unit biosynthesis
oco00541
O-Antigen nucleotide sugar biosynthesis
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01250
Biosynthesis of nucleotide sugars
Module
oco_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OCA4_c32730 (rfbC1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OCA4_c32730 (rfbC1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OCA4_c32730 (rfbC1)
Enzymes [BR:
oco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OCA4_c32730 (rfbC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEI04370
LinkDB
All DBs
Position
complement(3454861..3455427)
Genome browser
AA seq
188 aa
AA seq
DB search
MKFNPSPLRGACTIELEKRGDDRGFFARMFCEREFADAGLETRFVQVNNSLTAKRGTLRG
LHYQLPPAAEVKVVRCVRGALYDVIVDLRPDSPTFRKWFGAELTADNRTMMYVPRGFAHA
FLTLTDDAEAMYLVSAFYSPENERGVRYNDPAFSIAWPVDPLEVSDKDRNWPDFNADFHG
TERMRNLA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatccgagcccgcttcggggcgcatgcacgattgagctggaaaagcgtggg
gacgatcgcggcttcttcgcgcgaatgttctgtgagcgcgagttcgcagacgccgggctt
gagacgcgttttgtgcaggtcaataattctctgacggccaagcggggcacgctgcgcgga
ttgcattatcagttgccgccagcggccgaggtgaaggtcgtccgttgcgtgcgcggcgcg
ctatacgatgtgatcgttgatttgcggcctgactcgccgactttccgtaagtggtttggg
gcagagctcaccgccgacaatcgcacgatgatgtacgtgccgcgcgggttcgcccatgcg
ttcctgacgctgacggatgacgcggaggcgatgtatctcgtcagtgctttctattcgccg
gaaaacgagcgtggtgtgcgctataacgatcccgcgttttcaatcgcgtggccggtcgat
ccgctggaagtctccgacaaagaccgcaattggcccgacttcaatgctgattttcacggc
accgagcggatgcggaatctggcatga
DBGET
integrated database retrieval system
