Ochrobactrum sp. MT180101: HGK82_03475
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Entry
HGK82_03475 CDS
T07147
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr00190
Oxidative phosphorylation
ocr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
HGK82_03475
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGK82_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocr03019
]
HGK82_03475
Enzymes [BR:
ocr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
HGK82_03475
Messenger RNA biogenesis [BR:
ocr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HGK82_03475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
PLDc
Motif
Other DBs
NCBI-ProteinID:
QOD64320
LinkDB
All DBs
Position
1:725531..727825
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AA seq
764 aa
AA seq
DB search
MSENSVMASETPNAIEGGTHEMTAGLAPNPTVVPDADVAPDVHKALNGELMQSSDRFVNR
EFSWLQFNRRVLEEAANMRQPLLERLRFLSISAANLDEFFMVRIAGLAAQVRAGVAMRSA
DGRTPQEQLDFVLDEVGRLQEEQQERLRMLREELEQDSIEIVRPSALSKPEKEWLENHFL
ETIFPVLTPLSIDPAHPFPFIPNLGFSIALQLARRADNHPMTALLRIPVALKRFIQLPTD
QQNTYRFITIEDAVSLFIGRLFPGYEVRGAGTFRIIRDSDIEVEEEAEDLVRLFETALKR
RRRGQVIRIEFDGEMPEALRVFVATELGVSENRISVHEGLLALNMISEIVSIPRDDLKFV
SYNPRFPERIREHGGDCFAAIREKDIVVHHPYESFDVVVQFLRQAAADPDVLAIKQTLYR
TSNDSPIVRALVDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTH
AKMSLVVRREDQKLRSYVHLGTGNYHPITARIYTDLSFFTSDADIARDVAHIFNFITGYA
QPAEEMKIAISPFTLRARILKHIEDEVAHVKAGRPAAIWMKMNSLVDPQIIDALYVASQA
GVQIDLVVRGICCLRPGVPGLSDNIRAKSIVGRFLEHSRIFCFGNGNDLPSDKAIVYIGS
ADMMPRNLDRRVETLVPITNATVHQQILSQIMFANIIDNQQSYQLLADGTSRRIEKEAGE
EAFNAQEYFMTNPSLSGRGKSLKSSAPRLIAHRKRAQAERKTTA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacagcgttatggcgagcgaaacccccaacgcgattgaaggcgggacacac
gaaatgacagccggactagcccccaacccaaccgtcgttcccgatgcggacgtagcccct
gacgttcacaaagctttgaacggcgaattgatgcaaagttccgatcgctttgtgaatcgc
gagttttcctggctgcaattcaaccggcgtgttctcgaagaagccgcgaatatgcggcag
cctctgcttgaacgcctgcgcttcctgtctatctccgccgccaatctcgatgaatttttc
atggtccgcattgccggtctcgccgctcaggtgcgcgccggtgtggcgatgcgcagcgcc
gatggacgcacgccgcaggaacagctcgacttcgttctggacgaagtagggcgcttgcag
gaagaacagcaggaacgcctgcgtatgctgcgcgaggaactggaacaggacagcatcgag
attgttcgcccgtcggcgctttcaaagcccgaaaaggaatggcttgaaaaccacttcctc
gaaacgattttccctgtcctgacgccactctccattgatccggcgcatccgttcccgttc
attccgaacctcggcttttccatcgccctgcagcttgcgcgccgcgccgataatcatccg
atgacggcccttctgcgtattccggtcgcgctcaagcgcttcattcagttgccgacagac
cagcaaaacacctaccgcttcatcaccatcgaggacgcggtgagcctgttcatcgggcga
ctgttccccggttacgaagtgcgcggcgccggtacgttccgcatcatccgcgacagcgat
atcgaagtggaagaagaggcggaagatctcgttcgtctcttcgagacagcactgaaacgt
cgccgtcgcggtcaggtgatccgcatcgagtttgatggcgaaatgccagaagccctgcgc
gtcttcgtggcgacggaacttggcgtttcggaaaaccgcatcagcgtgcatgaaggtctt
ctggcgctcaacatgatttcggagatcgtttcgatcccgcgggatgacctcaaattcgta
tcctacaatccgcgtttcccggagcgtattcgcgagcatggcggcgattgctttgcagcg
attcgtgaaaaggacattgtggtccatcacccctatgaatcgtttgacgtggtggtgcag
ttcctgcggcaggctgcagccgacccggatgtgctggcgatcaagcagacgctgtatcgt
acctccaatgacagcccgatcgtgcgcgcattggtcgatgctgcagaagcgggcaagtcg
gtaacggcgctggtcgagctgaaggcacgcttcgatgaggaagcgaatattcgttgggca
cgcgatctggagcgcgcgggcgttcaggtggtgttcggcttcatcgaattgaaaacccac
gcgaaaatgtcgctcgtggtacgccgtgaagatcagaagctgcgctcctatgtgcatctg
ggcacgggcaactatcacccgatcacggcgcgtatctataccgacctgtcgttctttacg
tcggacgcggatattgctcgcgacgtggcgcatatcttcaatttcatcacgggctatgcc
cagcctgccgaagagatgaagatagcgatttcacctttcacacttcgcgcgcgaatcctc
aagcacatcgaggacgaggttgcgcatgtgaaggcggggcgtccggctgcgatctggatg
aagatgaactcgctggttgatccacagattattgacgcgctctacgtggcgagccaggcg
ggcgtgcagattgatctggtcgtgcgtggcatctgctgcctgcgtccgggcgttccgggg
ctttccgacaatattcgcgccaagtcgattgtcggacgttttctcgagcacagccgcatt
ttctgcttcggaaatggcaatgacctgccttccgacaaggcaatcgtctatatcggttcc
gccgacatgatgccgcgcaatcttgatcgccgcgtggagacgcttgttccgatcacaaat
gcaacagtgcatcaacaaatcctgtcgcaaatcatgtttgccaacataattgataaccaa
cagagctatcagctacttgcggacggcacctctcgccggatagaaaaagaagcaggagag
gaagctttcaacgcgcaggaatatttcatgaccaatcctagcctgtcgggtcgcggaaag
tcgctgaagtcttcggccccccgccttatcgcgcatcgcaagcgcgcgcaggcggaaaga
aaaacgactgcatga
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