Oceanotoga sp. DSM 15011: OF820_09865
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Entry
OF820_09865 CDS
T08543
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs00190
Oxidative phosphorylation
ocs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
OF820_09865
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OF820_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocs03019
]
OF820_09865
Enzymes [BR:
ocs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
OF820_09865
Messenger RNA biogenesis [BR:
ocs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OF820_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RsmJ
Motif
Other DBs
NCBI-ProteinID:
UYO99372
LinkDB
All DBs
Position
2091392..2093506
Genome browser
AA seq
704 aa
AA seq
DB search
MENNIYFNRELSWIEFNNRVLEEAMDKQNPVLERLKFLAITSSNLDEFFMIRVAGLKEQV
EAGYEKRDISGRTPMEQLKEISMNIHTMIKKQYDCLNRSILPILKKERIRILNYNLLKKE
QLKKVKKYYETIVFPVITPMAIDQSRPFPKLPNKSLNIAVSLFKENENEKIAILQVPSII
PRFYEIEISDGTKTYILLEDIIMNNAENLFPGYVIKYMSPFRITRNADLSIDEEGAEDLL
QEIEKSLVQRKWGMPVRLEVFKKIDKKLLDILKTMLNLSNSDIYMINGPLDISSFMSIAL
LNDFGCLKYENFKPSPHKDFFNKDIFKVIKNKDILLFHPYQSFEHVVNFIERAAEDENVL
AIKQTLYRVSGDSPIVEALIKAAKNGKQVTVLVELKARFDEKNNIEWAKKLEKAGCYVVY
GLVGLKVHSKILLIVRKEYEGIKRYVHLSTGNYNDKTAKLYTDIGFFTSKESFGWDASAL
FNVLTGYSQPPEWKKFMVAPIGLQENIIKLIENEIMYAENGFEASIIIKVNSLLETPIID
ALYKASQKNVKIKLIVRGICALKPGIKNLSDNIEVISIVGRFLEHTRIYYFNNGNDFKIY
LSSADLMPRNLHRRVEILFPIEEKELKDELYDILKLTLEDTEKARILNSDGIYRRIDKRG
KKRLESQKEFINKYKINFKESLNKDMKDMLKPKKDLERDDKYNI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataatatttattttaacagagagcttagttggattgaatttaataatagagtt
ttagaagaagctatggataaacaaaatccagtacttgaaagattgaaatttttagctata
acctcttcaaatttagatgaattttttatgataagggttgccggattaaaagaacaggtt
gaagccggatatgaaaaaagagatatatcaggtagaacacctatggaacagttgaaagag
atatctatgaatatacatactatgataaaaaaacagtatgattgtcttaataggtctata
ttgccaatattaaaaaaagaaagaataagaattttgaattataatttattaaaaaaagag
caattgaaaaaagtaaaaaaatattatgaaactattgtttttcctgttataacacctatg
gcaattgatcaaagtagaccctttccaaaattaccaaataaaagtttgaatatagctgtt
tctttgtttaaagaaaatgaaaatgaaaaaatagcaattttacaagttccatctataata
ccaagattttatgaaatagaaattagtgatggaactaaaacttatatattgcttgaagat
ataataatgaataatgcagaaaatttgtttccgggatatgttataaaatatatgtctcca
tttagaattacgagaaatgcggatctttcaatagatgaggaaggtgcagaagatctttta
caagagatagaaaagtctcttgtacaaagaaaatggggaatgcctgtgagacttgaagtg
tttaaaaaaatagataaaaaacttttagatattttaaaaacaatgctcaacctttcgaat
tcagatatatacatgataaatggtcctttagatatttcatcttttatgagtatagcatta
ttgaatgattttggttgtttgaagtatgagaattttaaaccatcaccacataaagatttt
tttaataaagatatatttaaagttataaaaaataaagatatattgctttttcatccttat
caatcttttgaacatgtagtgaattttattgaaagagcggcggaagatgaaaatgtacta
gccataaaacaaacattatatagagtcagtggagattcacctattgtagaagcacttata
aaagctgctaaaaatggaaaacaagttacagttttagttgaattaaaggcgagatttgat
gaaaagaataatatagaatgggcaaagaaactcgaaaaagctggatgttatgtcgtttat
ggattagttggattaaaagttcatagtaagatacttttgattgttagaaaagaatatgaa
ggtataaaaagatatgttcatttgagtacgggaaattataatgataaaacagcaaaattg
tatacggatataggattttttacatctaaggagtcttttggttgggatgcttcagcttta
ttcaatgttcttacgggttattctcaacctccagaatggaaaaaatttatggtggctcca
attggattacaagaaaatataataaaattaatagaaaatgaaattatgtatgccgaaaat
ggttttgaagccagtataataataaaagtaaattcattacttgaaacaccaattatagat
gctctttataaagcatctcaaaaaaatgtgaaaataaaattaatagtcagaggtatttgt
gctcttaaacctggtataaaaaatttgagtgataatatagaagttataagtatagttgga
agatttttagaacatacaagaatatattattttaataatggaaatgattttaaaatatat
ctttcaagtgcagatttgatgccaagaaatttgcatagaagagttgaaatattatttcct
atagaagaaaaggaattaaaggatgaattatatgatattttaaaacttacccttgaagat
actgaaaaagcaagaattcttaattctgatggaatttatagaagaattgataaaagaggt
aaaaaaagattagaatctcaaaaagaatttataaataaatataagataaattttaaagaa
tctttgaataaggatatgaaagatatgttaaaaccaaaaaaagatttagaaagagatgat
aaatataatatataa
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