Oryctolagus cuniculus (rabbit): 100340600
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Entry
100340600 CDS
T03373
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04721
Synaptic vesicle cycle
ocu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100340600
04721 Synaptic vesicle cycle
100340600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100340600
Transporters [BR:
ocu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100340600
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100340600
NCBI-ProteinID:
XP_008269176
Ensembl:
ENSOCUG00000003640
UniProt:
A0A5F9CLU6
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Position
19:15613777..15656783
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AA seq
628 aa
AA seq
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METTPLNAQPGRSACKDGEDCRGSGVLRKGVAGDKAEPGQLSNGYSGVPGPGAGDDAGHA
ILAATTTLEAEAHPGGRETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYT
IMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGFAICIIAFYIASYYNTIMAW
ALYYLISSFTDQLPWTSCENSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRS
KGLQALGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGATL
PGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDAL
VTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVARDAGPSLLFITYAEAIANMPASTF
FAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHTWAKCREWFVLLVVITCFFGSLITLT
FGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRICWV
AISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGASSVICIPTYIIYRLIITPG
TFKERIIRSITPETPTEIPCGDIRLDAV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccctgaacgctcagcccgggcgctcggcctgcaaggacggagaggac
tgccggggcagcggggtgctgcggaagggcgtggcgggcgacaaggcggagcccggccag
ctgtccaatgggtactcgggggtgcccggccctggtgctggagacgacgctggccacgct
atcttggcagccacgaccacgctggaggcggaggctcatccaggagggcgggagacctgg
ggcaagaaggtggacttcctcctctcggtcatcggttacgccgtggacctgggcaacgtg
tggcgcttcccctacatatgttaccagaacggaggcggagcgttcctcctcccctacacc
atcatggccgtttttggggggatcccactcttctacatggagcttgcgctgggccagtac
caccgaaatggatgcatttccatatggcggaaaatctgcccgattttcaaagggatcggc
tttgccatctgcatcattgccttctacatcgcctcctactacaacaccatcatggcctgg
gccctctactacctcatctcctccttcacggaccagctgccctggaccagctgcgagaac
tcctggaacactggcaactgcaccaactacttctcagaggacaacatcacctggacgctc
cactccacatcccctgctgaggagttttacacgcgccacgtcttgcagatccaccggtct
aaggggctccaggccctggggggcatcagctggcagctagccctctgcatcatgctgatc
ttcactattatctacttcagcatctggaaaggtgtcaaaacatctggcaaggtggtgtgg
gtgacagccactttcccctacatcatcctgtccatcctgctggtgaggggggccaccctc
cccggagcctggagaggtgttctcttctacctgaaacccaactggcaaaaactcctcgag
acaggggtgtgggtggatgctgccgctcagatcttcttctctctcgggccgggctttggg
gtcctgttggccttcgccagctacaacaagttcaacaacaactgttaccaagacgccctg
gtgaccagcgtggtgaactgcatgaccagctttgtttccggattcgtcatcttcacggtg
ctcgggtacatggcggagatgaggaacgaagatgtgtctgaggtggccagagacgcgggc
cccagcctcctcttcatcacgtatgcggaagccatagccaacatgccagcatccactttc
tttgccatcatcttcttcctgatgctaatcacactgggcttggacagcacgttcgcaggc
ttggagggggtgatcacggccgtgctggatgagtttccgcatacctgggccaagtgtcgc
gagtggttcgtgctcctcgtggtcattacctgcttctttggctctctgatcaccctgact
tttgggggcgcctacgtggtgaagctgctggaggagtacgccacaggcccagccgtgctg
accgtcgcgctcatagaagcggtcgctgtgtcttggttctacggcatcactcagttctgc
agtgatgtgaaggagatgcttggcttcagccctggatggttctggaggatctgctgggtg
gccatcagccccctctttctcctgtttatcatttgcagttttttgatgagtccaccacag
ctacgacttttccaatataattatccccactggagtatcatcctgggctactgcattgga
gcttcgtctgtcatctgcatccccacgtatatcatttaccggctgattatcactcctggg
acgtttaaagagcgtattattcgaagtatcactccagaaaccccaacagagattccctgt
ggggacatccgcctggacgctgtgtaa
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