Oryctolagus cuniculus (rabbit): 100346309
Help
Entry
100346309 CDS
T03373
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04010
MAPK signaling pathway
ocu04020
Calcium signaling pathway
ocu04713
Circadian entrainment
ocu04925
Aldosterone synthesis and secretion
ocu04927
Cortisol synthesis and secretion
ocu04929
GnRH secretion
ocu04930
Type II diabetes mellitus
ocu04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100346309
04020 Calcium signaling pathway
100346309
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100346309
04925 Aldosterone synthesis and secretion
100346309
04927 Cortisol synthesis and secretion
100346309
09159 Environmental adaptation
04713 Circadian entrainment
100346309
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
100346309
04934 Cushing syndrome
100346309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocu04040
]
100346309
Ion channels [BR:
ocu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100346309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100346309
NCBI-ProteinID:
XP_051681478
Ensembl:
ENSOCUG00000002733
LinkDB
All DBs
Position
19:complement(34662630..34724079)
Genome browser
AA seq
2378 aa
AA seq
DB search
MDEEEDGAGAEESGQSRSFLRLNDLSGAGGRPGPGSAEKDPGSVDSEAEGLPYPALAPVV
FFYLNQDSRPRSWCLRTVCNPWFERISMLVILLNCVTLGMFRPCEDIACDSQRCRILQAF
DDFIFAFFAVEMVVKMVALGIFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAVR
TVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNR
CFLPENFSLPLSVDLERYYQTENEDESPFICSQPRENGMRSCRSVPTLRGDGGGGPPCGL
DYEAYNSSSNTTCVNWNQYYTNCSAGEHNPFKGAINFDNIGYAWIAIFQVITLEGWVDIM
YFVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRESQLMREQRVRFLSNA
STLASFSEPGSCYEELLKYLVYILRKAARRLAQVSRAVGVRAGLLSSPAPLGSQEPQASS
SCSRSHRRLSVHHLVHHHHHHHHHYHLGNGTLRAPRASPEIQDRDANGSRRLMLPAPSTP
TLSGGPAPGGAESVHSFYHADCHLEPVRCQAPPPRSPSEASGRTVGSGKVYPTVHTSPPP
EMLKEKALVEVAPSSGPPTLTSLNIPPGPYSSMHKLLETQSTGTCQSSCKISSPCLKADR
GACGPDSCPYCARAGSGEVELADREMPDSDSEAVYEFTQDVQQSDLRDPHGRRRRSQGCD
AEPSPVLAFWRLICDTFRKIVDSKYFGRGIMIAILVNTLSMGIEYHEQPEELTNALEISN
IVFTSLFALEMLLKLLVYGPFGYIKNPYNIFDGVIVVISVWEIVGQQGGGLSVLRTFRLM
RVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERDGDT
LPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTSSWAALYFIALMTFGNYVLFNLL
VAILVEGFQAEEISKREDTSGQLSCIQLPVNSQGGDATKSESEPDFFSPSLDGDGDRKKH
LALVSLGEHPELRKSLLPPLIIHTAATPMSLPKSNSTGLGEALGPSSRRTSSSGSAEPGV
AHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSLGRAPSLKRRSPSGERRSLLSGEGRES
QDEESSEEERASPAGSDRRHRGSLEREAKSSFDLPDTLQVPGLHRTASGRSSASEHQDCN
GKSASGRLARALRPDDPPLDGDDGDDEGNLSKGERIRAWVRARLPACCRERDAWSAYIFP
PQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAMERPKIDPHSAERIFLTLSNYIFTAV
FLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILGMLRVL
RLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFV
CQGEDTRNITNKSDCAEASYRWVRHKYNFDNLGQALMSLFVLASKDGWVDIMYDGLDAVG
VDQQPIMNHNPWMLLYFISFLLIVAFFVLNMFVGVVVENFHKCRQHQEEEEARRREEKRL
RRLEKKRRSKEKQMADLMLDDVIASGSSASAASEAQCKPYYSDYSRFRLLVHHLCTSHYL
DLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVLESVFKLVAFGFRRFFQD
RWNQLDLAIVLLSIMGITLEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRALL
DTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLECDETHPCEGLGRHATFRNFGMAFL
TLFRVSTGDNWNGIMKDTLRDCDQESTCYNTVISPIYFVSFVLTAQFVLVNVVIAVLMKH
LEESNKEAKEEAELEAELELELKTLSPQPRSPLGSPFLWPGAEGPDSPDSSKPGAPQPAA
HTRAASRFSLEHPTDRQLFDTISLLIQGSLDGELKLMEELAGPGGQPSAFPSAPSPGGSE
PQIALAEMEAMSLTSEILSDPSCSLALTDDSLPDEPHTLLLSALERNMEPHPEEVPAALG
PDLLTVRKAGVSRTHSLPNDSYMCRDGSTAEGSLGPRGWGLPKAQSGSVLSVHSQPADTS
YNLQLPKDAPNLLQPHSAPTWGTIPKLPPPGRSPLAQRPLRRQAAIRTDSLDVQGLGSRE
DLLSEARGPSPPLARSSSFWGRPSIRARQHFRSQSKISKHMALSALCPGPEPSRSKGPPE
TRSSFELDTELSWVSGDLLALGSQEAPPSPRDLKKCYSVEAQSGRRRPVSWLDEQRRHSI
AVSCLDGGSSLAGQPLGGPGSRPKKKLSPPSISIDPPESQGARPPASPGICLRRRAPSSD
AKDPSASGPSDSMAASPSPKKDVLSLSGLSSDPADLDP
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggaggatggagcgggcgccgaggagtcgggacagtcccggagcttcttg
cggctcaacgacctgtcgggggccgggggccggccggggccggggtcggcggaaaaggac
ccgggcagcgtggactccgaggcggagggactgccgtacccggcgctggccccggtggtt
ttcttctacttgaaccaggacagccgcccgcggagctggtgtctccgcacggtctgtaac
ccctggttcgagcgaataagcatgttggtcatcctactcaactgtgtgaccctcggcatg
ttccggccgtgcgaggacatcgcctgtgactcccagcgctgccggatcctgcaggctttt
gatgacttcatctttgccttcttcgcggtggagatggtggtgaagatggtggctttgggc
atcttcgggaaaaagtgttacctgggagacacttggaatcggcttgacttcttcatcgtc
atcgcggggatgctggagtactcgctggacctgcagaacgtcagcttctcggctgtcagg
acagtccgcgtgctgcgaccgctcagggccattaaccgggtgcccagcatgcgcatcctg
gtcaccctgctgctggacacgctgcccatgctgggcaacgtcctgctgctctgcttcttc
gtcttcttcatcttcggcatcgtgggcgtccagctgtgggcggggctgcttcggaaccga
tgcttcctgcctgagaatttcagcctccctctaagcgtggacctggagcgctattatcag
acggagaacgaggacgagagccccttcatctgctcgcagccgcgcgaaaatggcatgcgc
tcctgccggagcgtgcccaccctccgcggggacggcggcggcggcccgccctgcggcctg
gactacgaggcctacaacagttccagcaacaccacctgcgtcaactggaaccagtactac
accaactgctccgcgggcgagcacaaccccttcaagggcgccatcaacttcgacaacatc
ggctacgcctggattgccatcttccaggtcatcacactggagggctgggtggacatcatg
tacttcgtcatggatgcccactccttctacaacttcatctacttcatcctcctcatcatc
gtgggctccttcttcatgatcaacctgtgcctggtggtgattgccacgcagttctcagag
accaagcagcgggaaagccagctgatgcgggagcaacgggtgcggttcctgtccaacgcc
agcaccctggccagcttctccgagccgggcagctgctacgaggagctgctcaagtacctg
gtgtacatcctccggaaagcagcccgcaggctggcgcaggtgtctcgggcagtgggcgtg
cgggcggggctgctgagcagtccagctccacttgggagccaagagccccaggccagcagc
agctgctctcgctcccaccgccgcctgtctgtccaccacctggtgcaccaccaccaccac
catcaccatcactaccacctgggcaatgggacactcagggccccccgggccagtccagag
atccaggacagggatgccaacgggtcccgccggctcatgctgccagcaccctcgacgccc
accctctctgggggtcctgcgccagggggtgcagagtctgtgcacagcttctaccatgct
gactgccacttggaaccagtccgctgccaggcgccccctcccaggtccccctcggaggca
tcgggcaggactgtgggcagtgggaaggtgtaccccaccgtgcacaccagccccccgcca
gagatgctgaaggaaaaggcgctagtagaggtggcccccagctctgggccccccaccctc
accagcctcaacatccctcctgggccctacagctccatgcacaagctgctggagacacag
agtacaggcacctgccaaagctcttgcaagatctccagcccttgcctgaaggcagaccgg
ggagcctgtggccccgacagctgcccctactgtgcccgggcaggctcaggggaggtggag
ctcgccgaccgtgagatgcccgactcggacagtgaggccgtttatgagttcacgcaggac
gtccagcagagtgacctccgtgacccccacggccggcggcgacggagccagggctgcgac
gcagagcccagccccgtgctggctttctggaggctgatctgtgacaccttccggaagatc
gtggacagcaagtacttcggccggggaatcatgatcgccatcctggtcaatacgctcagc
atgggcatcgaataccacgagcagcccgaagagctgaccaacgccctggaaatcagcaac
atcgtcttcaccagcctcttcgccctggagatgctgctaaagctgctcgtgtacggtccc
ttcggctacattaagaatccctacaacatcttcgatggcgtcatcgttgtcatcagcgtg
tgggagatcgtgggccagcaggggggcggcctgtcggtgctgcgcaccttccgcctgatg
cgcgtgctgaagctggtgcgcttcctgccggcgctgcagcggcagctcgtggtgctcatg
aagaccatggacaacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttc
agcatcttgggcatgcacctgttcggctgcaagtttgcatcggagcgggacggggacacg
ctgccagaccggaagaattttgactccttgctctgggccatcgtcacagtctttcagatc
ctgacccaggaggactggaacaaagtcctctacaatggcatggcctccacgtcatcctgg
gctgcgctgtatttcattgcgctcatgaccttcggcaactacgtgctctttaacctgctt
gtcgccattctggtggagggcttccaggcggaggaaatcagcaaacgggaagatacgagt
ggacagttaagctgtattcagctgcctgtcaactcccaggggggagatgccaccaagtct
gagtcggagcctgatttcttctcacccagcctggatggtgatggggacaggaagaagcac
ttggccttggtgtccctgggggagcacccagagctgcggaagagtctgctgccccctctc
atcatccacacagctgccacgcccatgtcgctgcccaagagcaacagcacgggcctgggc
gaggcgctggggcccagctcccgccgcaccagcagtagcgggtctgccgagcccggggtg
gcccacgagatgaagtcaccgccgagtgcccgcagctccccgcacagcccctggagcgcc
gccagcagctggaccagccggcgctccagccgcaacagcttgggccgagcccccagcctc
aagcgcaggagcccgagtggggagaggcggtcgctgctgtcgggcgagggccgggagagc
caggacgaggagagctcggaagaggagcgggccagccccgcgggcagtgaccgtcgccac
aggggctccctggagcgggaggccaagagctccttcgacctgccagacacactgcaggtg
cccgggctgcaccgcacagccagtggccgcagctctgcctctgagcaccaggactgcaat
ggcaagtcggcttcggggcgcctggcccgggccctgcggcccgatgaccccccactggat
ggggatgacggcgatgacgagggcaacctgagcaaaggtgagcggatccgagcctgggtc
cgggcccggctccctgcctgctgccgtgagcgagatgcttggtctgcctacatcttccct
cctcagtcgagattccgcctcctgtgtcaccggatcatcacccacaagatgttcgaccac
gtggtccttgtcatcatcttcctcaactgcatcaccattgccatggagcgccccaaaatc
gaccctcacagcgctgaacgcatcttcctgaccctctccaactacattttcaccgccgtc
tttctggctgaaatgacagtgaaggtggtggcgctgggctggtgcttcggggagcaggcc
tacctgcgcagcagctggaacgtgctggacgggctgctcgtgctcatctcggtcatcgac
atcctggtgtcaatggtctcggacagcggcaccaagatcctgggcatgctcagggtgctg
cggctgctgcggaccctgcgcccgctcagggtcatcagccgggcacaggggctgaagctg
gtggtggagacgctgatgtcttcactgaagcccattggcaacatcgtggtcatctgctgt
gccttcttcatcatcttcggcatcctgggcgtgcagctcttcaaagggaagttcttcgtg
tgccagggcgaggacaccaggaacatcaccaacaagtctgactgtgccgaggccagttac
cggtgggtccggcacaagtacaacttcgacaacctcggccaggccctgatgtccctgttc
gtgctggcctccaaggatggctgggtggacatcatgtacgatggacttgatgccgtgggt
gtggaccagcagcccatcatgaaccacaacccctggatgctgctctacttcatctcgttc
ctgctcatcgtggccttctttgtcctgaacatgtttgtgggcgtggtggtggagaatttc
cacaagtgccggcagcaccaggaagaagaggaggcgcggcggcgggaggagaagcgcctg
cggagactggagaaaaagagaaggagtaaggagaagcagatggccgatctaatgctggac
gatgtaattgcttccggcagctcagccagtgctgcgtcagaagcccagtgcaaaccctac
tattcggactactcccgcttccggctccttgtccaccacctgtgcaccagccactacctg
gatctcttcatcacgggtgtcattgggctgaatgtggtcaccatggccatggagcactac
cagcagccccagatcctggacgaggctctgaagatctgcaactacatcttcaccgtcatc
ttcgtcttggagtctgtcttcaaactcgtggcctttggtttccgccgcttcttccaggac
aggtggaaccagctggacctggccatcgtgctgctgtccatcatgggcatcacactggag
gagatagaggtcaacgcctcgctgcccatcaaccccaccatcatccgcatcatgagggtg
ctgcgcatcgcccgagtgctcaagctgctgaagatggctgtgggcatgcgggcgctgctg
gacacggtgatgcaggcccttccccaggtggggaacctgggacttctcttcatgttgttg
tttttcatctttgcagctctgggcgtggagctctttggagacctggagtgtgacgagaca
cacccctgtgagggcctgggccggcatgccactttccggaactttggcatggccttcctg
accctcttccgggtctccactggggacaactggaacgggatcatgaaggacacgctccgg
gactgtgaccaggagtccacctgctacaacacggtcatctcccccatctacttcgtgtcc
ttcgtgctcacggcgcagttcgtgctggtcaacgtggtgatcgccgtgctgatgaagcac
ttggaggagagcaacaaggaggctaaggaggaggccgagctggaggccgagctggagctg
gagctgaagaccctcagcccgcagccccgctcgccgctgggcagccccttcctctggccc
ggggccgagggtcccgacagccccgacagctctaagcccggggccccacagcccgcagcc
cacaccagagcagcctcccgcttctcgctggagcaccccacggacagacagctgtttgac
accatttccctgctgatccagggctccctggacggggagctgaagctgatggaggagctg
gcgggcccgggaggccagccctctgccttcccttccgcccccagcccgggcggctccgaa
ccacagatcgctctagcggagatggaggctatgtctctgacgtcagagattctgtctgac
ccgtcctgctctctagctctgacggatgattctttgcctgatgagcctcacacactctta
cttagtgccctggagcgcaacatggagccacaccccgaggaggtgcccgccgccctggga
ccagacttgctgactgtgcgcaaggctggggtcagccgaacacactctctgcccaacgac
agctacatgtgcagggacgggagcactgccgaggggtccctgggacccaggggctggggg
ctccccaaggcccagtcaggctctgtcttgtctgtccactcccagccagcagataccagc
tacaacctgcaacttcccaaagacgcacccaacctactccagccccacagcgccccgacc
tggggcaccatccccaaactgcccccaccgggccgctcccctttggctcagaggccactc
agacgccaggcagcaataaggacggattccttggacgttcagggcctgggcagccgggag
gatctgctgtcggaggcgcgcgggccctctccgcccctggcccggtcctcctccttctgg
ggccggccgagcatccgggcccggcagcactttcgcagccagagcaagatctcgaagcac
atggccctgtcagccctttgccctggccccgagcccagccggagcaagggccctccagag
accagaagcagcttcgagctggacaccgagctgagctgggtttcgggggacctcctggcc
ctgggcagccaggaggcgccgccctccccgcgtgacctgaagaagtgctacagtgtggag
gctcagagcggccggcgccggcctgtgtcctggctggacgagcagaggagacactccatt
gccgtcagctgcctggacggcggctccagcctcgcgggccagccgcttgggggacctggg
agccggcccaagaaaaaactcagcccgcccagtatctccatagaccctcccgagagccag
ggcgcgcggcccccggccagccccggcatctgcctccggaggagggctccgtccagcgac
gccaaggatccctcggcctccggcccctctgacagcatggctgcctcgccctccccaaag
aaagacgtgctgagtctctccggtttatcctctgaccctgcagacctggacccctga
DBGET
integrated database retrieval system
