KEGG   Oryctolagus cuniculus (rabbit): 100351645
Entry
100351645         CDS       T03373                                 
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu01524  Platinum drug resistance
ocu03430  Mismatch repair
ocu05200  Pathways in cancer
ocu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100351645
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100351645
  09162 Cancer: specific types
   05210 Colorectal cancer
    100351645
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    100351645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100351645
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     100351645
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP Herpes_UL6
Other DBs
NCBI-GeneID: 100351645
NCBI-ProteinID: XP_002709926
Ensembl: ENSOCUG00000014615
UniProt: G1T7S2
LinkDB
Position
2:complement(138893785..138915396)
AA seq 1361 aa
MSRQSTLFSFFPKTPLPNKSPGRASRDGGGARAATGASASPSGDEAWSEAGPGPRPLADS
ASSPKARNLNGGLRRSAAPAVHVSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIRQ
KGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMERADEA
LNKDKIKRLELAVCDEPSEQEEEEEEMEVAPTYTSDKSEEDNEIESEEEVQPKLQGSRRS
SRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEVSSAVGDSESEGLDSPVKVVPKRK
RMVTGNGSLKRKNSRKEMPSATKRAPGILAETKSTLSTFSAPQNSESPAQVSGGGGDDSG
RPTTWYHETLEWLKKEKRRDAHRRRPDHPDFDASTLHVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKHDRVVRREICRIITKGTQTYSVLEGDPSENYSKFLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFSIGQFADDRHCSRFRTLVAHYPPAQVLFEKGN
LSVETKAVLKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKSNEESGVLLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAT
RPGAVFSKASQRMVLDAVTLNNLEVFLNGTNGSTEGTLLEKIDTCYTPFGKRLLKHWLCA
PLCSPCAINDRLDAIEDLMAVPDKVSEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKTMCKIVEVVEDVVDDFKSKLLTQVVTLQTKNPEG
RFPDLTMELHRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLDYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDLSLKDCMRRLFYNFDKNYKDWHSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPGENTAPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEDEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQN
DAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASERSTIDAEALHKLLTLIKEL
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcaccctgtttagcttcttccccaagactccgctgccgaacaagtcc
ccgggcagggcctcacgagacggcggcggtgcccgcgctgccacgggggcctccgcttcc
cccagcggggatgaggcctggagcgaggctgggcctgggcccaggcccctggcggactct
gcgtcgtcaccaaaggcgaggaacctgaacggagggcttcgcaggtcagcggcgcccgcc
gtccacgtcagttcttgtgacttctcaccaggtgatttggtttgggccaagatggagggt
tacccctggtggccttgtctggtgtacaaccacccctttgatggaacattcatccgccag
aaagggaaatcagttcgtgtccatgtacagttttttgatgacagcccaacaagaggctgg
gttagcaaaaggctgttaaagccgtacacaggttcaaaatcgaaggaagcccagaaggga
ggtcatttttatagttcaaagcctgaaatactgagagcaatggaacgcgcagatgaagcc
ttaaataaagacaaaattaagaggcttgaattggcagtgtgtgatgagccctcagagcaa
gaggaggaggaagaagagatggaggtagctccaacttacacatcagataagagtgaagaa
gataatgagattgagagtgaagaggaagtgcagcctaaattgcaaggatctaggcgaagt
agccgccaaataaaaaaacgaagggtcatttcagattctgagagtgacattggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaagttagcagtgca
gtgggtgacagtgagagtgaaggcctggacagccctgtcaaagttgttcccaagcgaaag
agaatggtgactggaaatgggtctcttaaaaggaaaaattcaaggaaggagatgccctca
gccaccaagcgagcacctggcattttggcagaaaccaagagtactttgagtactttctct
gctcctcagaattctgagtcccctgcccaggttagtggaggaggaggtgatgacagtggt
cgccccactacctggtaccatgaaactttagaatggcttaaaaaggaaaagagaagagat
gcacacaggaggcggcccgatcaccccgactttgatgcatccacgctccatgtgcctgaa
gatttcctgaattcctgtactcccggcatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatcttctataaggtggggaagttttatgaactgtatcatatggatgct
cttattggcgtcagtgaactggggctggtattcatgaaaggcaactgggcgcattctggt
tttcctgaaattgcttttggccgatactcggattccttggtgcagaagggctataaagta
gcacgcgttgaacagactgaaaccccagaaatgatggaggcaagatgccgaaagatggca
cacatatctaagcatgacagagtggtaaggagggagatttgtaggatcatcaccaagggt
acacagacctacagtgtgctggaaggtgacccttctgagaactacagtaagtttcttctt
agcctgaaggagaaagaggaagattcttctgggcacactcgtgtgtatggtgtgtgcttt
gttgacacgtcactggggaagttttccataggtcagtttgcagatgaccgccattgctcc
aggtttaggaccctagtggcacactatcctccagcgcaagtcttgtttgagaaaggaaat
ctctcagtcgaaaccaaggcagtcctgaagggctcattatcctcttctcttcaggagggt
ctgataccaggctcccagttttgggatgcagccaaaactctgagaactctcctcgaagaa
gggtattttacagaaaagtcaaatgaggagagtggggtgctgttaccccaggtgcttaaa
ggtatgacctcagagtccgattccattgggttgacaccaggagagaagagtgaattggcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcctttggattctgacatggtcagtgctaca
agacctggtgctgtcttctctaaagccagtcagcgaatggtgctagatgcagtgacctta
aacaacttggaggtttttctgaatgggacaaatggctccactgaagggaccttgttagag
aagattgatacttgctacactccctttggtaagcggctcctcaagcactggctttgtgcc
ccactctgtagcccttgtgctatcaatgatcgtctagatgccatagaagacctcatggct
gtgcctgataaagtctctgaagttgtagaccttctgaagaagcttccagatcttgaaagg
cttctgagtaaaattcacaacgttgggtctcccctaaagagccaaaaccacccagacagt
agggctataatgtatgaagaaactacatacagcaaaaaaaagataattgattttctttct
gctcttgaaggattcaaaacaatgtgtaagattgtagaggttgtggaagacgtcgtcgat
gactttaagtcaaaactcctgacgcaggtcgtaactttgcagacaaaaaaccctgaaggc
cgttttcctgatttgactatggaactgcaccgatgggatacggcctttgaccatgaaaag
gctcggaagactggactcatcactcccaaagcaggatttgacagtgattatgaccaagct
cttgctgatataagagaaaatgaacagagcctcctggactacttagagaaacaacgcagt
cgaattggctgtaggaccatagtctactgggggattggtaggaaccgctaccagttggaa
atcccagagaatttcaccacccgcaatttgccagaagagtatgagttgaaatctaccaag
aaaggctgcaaaagatactggaccaaaactattgagaagaaattggccaatctgataaac
gcagaagaacggagagacctatcactgaaggactgcatgcgacgactattctacaacttt
gataaaaactacaaggactggcattctgctgtagagtgcatcgcagtgctggatgtctta
ctgtgcttggctaactacagtcgagggggtgatggccctatgtgccgtccagtaattctg
ttgccaggagaaaacacggctcccttcttagagcttaaaggatcacgtcacccctgcatt
acaaagacattttttggagatgattttattcctaacgacattctaataggctgtgaggaa
gatgaggaagaaaatggcaaagcctattgtgtgcttgttactggaccgaatatggggggc
aagtctaccctcatgagacaggctggcctattagctgtaatggcccagatgggttgttat
gtacctgctgaagtgtgtaggctcacgccaattgatagagtgtttactagactcggtgcc
tcagatagaataatgtcaggtgaaagtacattttttgttgaattgagtgagacggccagc
atacttacacatgcaacagcacattccctggttcttgtagatgaattaggaagaggtact
gcaacctttgatgggacagcaatagccaatgcagttgttaaagaacttgctgagactatt
aagtgtcgtactttgttttctactcactaccattcattagtagaagattattctcaaaat
gatgctgtgcgtctaggacatatggcatgcatggtagaaaatgagtgtgaagaccccagt
caggagactattaccttcctctataaattcattaagggagcttgtcccaagagctatggc
ttcaatgcagcgagacttgctaatcttccagaagaggtcattcaaaagggacacagaaaa
gcgagagaatttgagaagatgactcaatcactacgattatttcgggaagtttgcctggct
agtgagaggtcgactatagatgctgaagcgctccataagttgctgactctgattaaggaa
ttatag

DBGET integrated database retrieval system