Oryctolagus cuniculus (rabbit): 100355224
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Entry
100355224 CDS
T03373
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X2
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03020
RNA polymerase
ocu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100355224
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100355224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100355224
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100355224
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100355224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100355224
NCBI-ProteinID:
XP_002718445
Ensembl:
ENSOCUG00000012450
UniProt:
G1T3C7
LinkDB
All DBs
Position
18:6532216..6580932
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHILLSPE
EKKQFLDYLKRPGLTYLQKRGLKKKISEKCRKKNACHHCGAVNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSTFLQSFETAIEHNREVEPLLGRAQENLNPLIVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANF
IQQRHMHMKRFLKYGNREKMAQELKYGDVVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDSPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFPCQNEPALSKNELILTSEAIMKKNEFLC
CQDSFLQEIKKFIKGVSERIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVRGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPNPPRRPLIFD
TSEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggacgtggccaagaaaataagccacatctgtttt
ggaatgaagtcccccgaggagatgcggcagcaggcgcacatccaggttgtgagcaagaac
ctgtacagtcaggacaacaaccacgccccgctgctgtatggcgtgctggaccacaggatg
ggtacgagtgagaaggaccgtccttgtgaaacctgtgggaagaacttggccgactgtctg
ggccattatggctacattgacctggagttgccgtgtttccacgtggggtacttcagagcc
gtcataggcatcttacagatgatctgcaagacctgctgccacatcctgctgtccccggag
gagaagaagcagttcctggattacctcaagaggcccggcctcacctacctgcagaagcga
gggctgaagaagaagatctcggagaagtgccgcaagaagaatgcctgccatcactgtggc
gccgtcaatggtactgtgaagaaatgtggactactgaagataattcacgagaaatacaag
accaacaagaaggtggtggaccccatcgtctccactttccttcagtcttttgaaacggcc
attgaacataacagagaagtggagccgctcctggggagggcacaggaaaacttgaatccc
ttaatagttctgaacttatttaaacgaatcccggctgaagatgtccctctcctcctcatg
aacccagaagctggaaagccctctgacttgatcctcacccggctcttggtgcctcccctg
tgtatcagaccctctgtcgtgagtgacctgaagtccggcaccaatgaagatgatctgacg
atgaaattgacagaaataatctttctaaatgacgtcattaaaaagcaccggatctcaggc
gccaagacgcagatgatcatggaggactgggacttcctgcagctgcagtgtgcgctctac
atcaacagcgagctctcaggcatccccctcaacatggcgcccaaaaagtggaccagaggc
ttcgtgcagcgtctcaagggcaaacaaggtcggttcagaggcaatctgtcgggaaagaga
gtggatttttctggcagaactgtcatctcacctgaccccaacctccggattgatgaagta
gctgtcccggttcatgtggccaaaattctaacttttcctgagaaggtgaataaagcaaac
atcaattttttgaggaaactggttcaaaatggccctgaagtgcacccaggagctaacttc
attcagcagaggcacatgcacatgaaaaggtttctgaagtacgggaatcgtgaaaagatg
gcgcaggagctcaagtacggggacgtcgtggagagacacctgatagacggggatgtggtg
ctcttcaaccggcagccctccctgcacaaactgagcatcatggcgcacctggccagggtc
aagccccatcggacgttcaggttcaacgagtgtgtctgcacgccttacaacgcggacttc
gatggcgacgagatgaatcttcacttgcctcagacggaggaggccaaagcagaggccctc
gttctcatggggactaaagcaaatcttgtaaccccaaggaatggtgagcccctgatagct
gctattcaggatttcctaacaggtgcctacctccttactctcaaagacactttcttcgac
cgagccaaggcttgccagatcattgcctccatactggtcggcaaagatgagaaaatcaaa
gtccgcctcccaccccctacaatattaaagcctgtcaccctgtggactggcaagcagatc
ttcagtgttatcctgaggcctagtgacgacagcccagtgagggccaatctgcggaccaag
ggcaagcagtactgtggcaaaggagaagacctgtgtgtcaatgactcctatgtcaccatc
caaaacagtgaattgatgagtgggagcatggacaaaggcactttgggttctggatccaag
aacaacattttctacatcttgctgcgagactggggacagaatgaagctgctgatgcgatg
tctcggctggccaggctggctcctgtctacctgtcaaaccgcggcttctccattgggatt
ggtgacgtcacacctggccagggactgctgaaggccaagtatgagttgttgaatgctggc
tacaagaaatgtgatgagtacatcgaagccctgaacaccggcaagctgcagcagcagcct
ggctgcacagccgaggagaccctggaggctctgatcctgaaggagctgtctgtgatccgt
gaccacgccggcagtgcctgcctccgggagctggacaagagcaacagccccctcaccatg
gctctctgtggttccaaaggttccttcattaacatatcacagatgatcgcctgtgtgggg
cagcaagccatcagcggctcccgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctcccagctgccaagggctttgtggctaatagcttttattcc
ggtttaactcccactgagtttttcttccacacaatggctggtcgggaaggtctagtcgac
acagccgtgaagacagcagaaacgggatatatgcagagaaggcttgtgaagtctcttgaa
gacctatgctcccagtatgatctgacggtccgaagctctaccggcgatatcatccagttc
atttacgggggagacggcttagaccctgcagccatggagggaaaagatgaacctttggag
tttaaaagggtcctggacaacatcagagcagtcttcccgtgccagaacgagcctgcgctc
agcaagaacgagttgatcctgacgagcgaggccatcatgaagaagaacgagttcctgtgc
tgccaggacagcttcctgcaggaaataaaaaaattcattaagggggtttctgagaggatc
aagaaaaccagagataaatacggcatcaatgataacggcacgacagagccccgtgtgctg
taccagctggaccggatcacccccacccaaatagaaaagtttctggagacctgtcgggac
aagtacatgagagcacagatggagccggggtctgcagtgggtgcattgtgcgcccagagt
attggggagccaggcacccagatgaccctgaagactttccactttgcaggcgtggcctcc
atgaacatcaccctgggcgtgcctcgcatcaaagagatcatcaatgcttccaaggccatc
agcactcccattatcacagcacagctggacaaggacgacgacgcggactacgcgcgcctc
gtgaaggggagaattgagaaaaccctcttgggggagatttcggagtacatcgaagaagtg
tttcttcctgatgactgctttattctcgtcaagctctccctggagcggattaggctgctg
agactggaagtgaacgctgagaccgtgcgctattccatctgcacgtccaagctgcgcgtg
aagccgggcgacgtggccgttcacggcgaggctgtggtgtgtgtcacccccagagagaac
agcaagagctccatgtactacgtactacagttcctgaaggaggatctccccaaggtggtg
gtacagggcatcccagaagtctccagagctgtcatccacattgacgagcagagcgggaag
gagaagtacaagctgctggtggaaggcgataacctgcgggcagtcatggccacccacggc
gtgcggggcaccagaaccacctccaacaacacgtatgaggtggagaagacactgggcatc
gaggctgcccggaccaccatcatcaatgaaatccagtacacgatggtcaaccacggcatg
agcatcgacaggaggcacgtcatgctgctctccgacctgatgacctacaagggggaagtc
ctgggcatcacccggtttggcctggccaagatgaaggagagtgtgctgatgctggcgtcc
ttcgagaagaccgctgaccatctcttcgacgctgcctactttggccagaaggactccgtc
tgtggggtgtccgagtgcatcatcatgggaatcccgatgaacatcggcaccggcctcttc
aagctgctccacaaggccaacagggaccccaaccctcccagaaggcccttgatcttcgac
acaagcgagttccacatcccccttgtcacgtag
DBGET
integrated database retrieval system
