Oryctolagus cuniculus (rabbit): 100358832
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Entry
100358832 CDS
T03373
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu00310
Lysine degradation
ocu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100358832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100358832
03036 Chromosome and associated proteins [BR:
ocu03036
]
100358832
Enzymes [BR:
ocu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100358832
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100358832
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100358832
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100358832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
SET
KRAB
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_9
Motif
Other DBs
NCBI-GeneID:
100358832
NCBI-ProteinID:
XP_051694652
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MSAAAPAEPSPGADAGQARGKPEVQDAFRDISIYFSKEEWAEMGEWEKIRYRNVKRNYCA
LVAIGLRAPRPAFMCHRRLAVRARADDTEDSDEEWTPRQQVKPPWMAFRTEHSKHQKGMP
RLPVNNESSLKELSGTANLLKTTGSEEDQKPSFPPKETRTSGQHSTRKLGLRRKNIEVKM
YSFRKRKSQAYKECSEPQDDDYLYCEKCQNFFLDSCAVHGPPIFVKDSAVDKGHPNRSVL
SLPPGLRIGPSGIPEAGLGVWNEASDLPLGLHFGPYEGQITEEEEAANSGYSWLITKGRN
CYEYVDGKDRSWANWMRYVNCARNDEEQNLVAFQYHKQIFYRTCQVIKPGCELLVWYGDE
YGQELGIKWGSKWKEELTAGREPKPEIHPCPSCSLAFSSHKFLSQHMERSHSSQIFPGAP
ARNHLQPANPCPGKEHQKLSDPQSWNDKNEGQDVKEKSRFSSKRTRQKAISRSFSSLPKG
QVETSREGERMIEEEPRIGQELNPEDTGKSSVGAGLSRIAGVKYRDCRQGLSDKSHLING
QRAHTGEKPYACRECERGFTVKSNLISHQRTHTGEKPYACRECGRGFTVKSALTTHQRTH
TGEKPYACRECGRGFTVKSHLISHQRTHTGEKPYACRECGRGFTVKSALITHQRTHTGEK
PYACRECGQGFTVKSNLISHQRTHTGEKPYACRECGRGFTVKSHLINHLRAHTGEKPYAC
RECGRGFTVKSDLISHQRTHTGEKPYACRVDG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcggctcccgcggagccgagcccgggggcagacgcaggccaggcgcggggg
aagccggaggtccaagatgccttccgggatatttccatctacttctccaaggaagagtgg
gcagagatgggcgagtgggagaagatccgctaccggaacgtgaagaggaactactgcgcg
ctagtagccataggtctcagagccccgcgaccggctttcatgtgtcaccgaaggctggca
gtcagagcccgggcggatgacacggaggactccgacgaagaatggacgcctaggcagcaa
gtcaaacctccttggatggccttcagaacggaacacagcaaacaccagaaggggatgccc
aggttgcctgtaaataatgaatctagtttgaaggaattgtcaggaacagcaaatttgctg
aagacaactggctcagaggaggaccagaaaccatcgttccctcctaaagaaacgaggaca
tctggacagcactccacacgaaaattgggacttagaaggaagaatattgaagtgaagatg
tacagctttcgaaaaagaaagagtcaggcatacaaagagtgcagtgagcctcaggatgac
gattacctctattgtgagaagtgtcagaacttcttcctagacagctgtgctgttcacgga
ccacccatatttgtaaaggacagtgcagtggacaaggggcatcccaatcgctcagtcctc
agcctgccccctgggctaagaattggaccatcaggcatccctgaggctgggcttggagta
tggaacgaggcatcagatctgccactgggtctgcactttggtccctacgagggccagatc
acagaagaggaggaggcagccaacagcgggtactcctggctgatcaccaaggggagaaac
tgctatgagtatgtggatggaaaggatagatcttgggccaactggatgaggtatgtgaac
tgtgcccggaacgacgaggagcagaacctggtggcctttcagtaccacaagcagatattc
taccgcacctgccaggtcatcaagcctggctgtgagctgctggtctggtatggggacgaa
tatggccaggagctggggatcaagtggggcagcaagtggaaggaagagctcacagcaggg
agagagccaaagccagaaatccatccctgtccctcgtgctctctggccttctccagtcac
aagttcctcagtcaacacatggagcgcagtcactcctctcagatcttcccaggagcacct
gcaagaaatcacctgcaaccagcgaatccctgtccagggaaagagcatcagaagctgtct
gatccacagagctggaatgacaaaaacgaaggtcaagacgtcaaagaaaagtccagattc
tcgtccaaaaggacaaggcagaaggcgatctcaaggtctttttccagccttcccaaagga
caagtggagacctcaagggagggtgagagaatgatagaggaagagcctagaataggccaa
gaactgaatccagaggacacaggcaaatcatctgtgggggcagggctgtcaagaattgca
ggagtcaagtatagagattgtaggcaaggcctcagtgacaagtcacacctcattaatggc
cagagagcacacacaggggagaagccctatgcttgcagggagtgtgagcgaggcttcaca
gtgaagtcaaacctcatcagtcaccagaggacacacacaggggagaagccctatgcttgc
agggagtgtgggcgaggcttcacagtgaagtcagccctcactactcaccagaggacacac
acaggggagaagccctatgcttgcagggagtgtgggcgaggcttcacagtgaagtcacac
ctcatcagtcaccagaggacacacacaggggagaagccctatgcttgcagggagtgtggg
cgaggcttcacagtgaagtcagccctcatcactcaccagaggacacacacaggggagaag
ccctatgcttgcagggagtgtgggcaaggcttcacagtgaagtcaaacctcatcagtcac
cagaggacacacacaggggagaagccctatgcttgcagggagtgtgggcgaggcttcaca
gtgaagtcacacctcatcaatcatctgagggcacacacaggggagaagccctatgcttgc
agggagtgtgggcgaggcttcacagtgaagtcagacctcatcagtcaccagaggacacac
acaggggagaagccctatgcttgtagggtggatgggtaa
DBGET
integrated database retrieval system
