Oceanirhabdus sp. W0125-5: OW730_17565
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Entry
OW730_17565 CDS
T08747
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ocw
Oceanirhabdus sp. W0125-5
Pathway
ocw00010
Glycolysis / Gluconeogenesis
ocw00020
Citrate cycle (TCA cycle)
ocw00620
Pyruvate metabolism
ocw00650
Butanoate metabolism
ocw01100
Metabolic pathways
ocw01110
Biosynthesis of secondary metabolites
ocw01120
Microbial metabolism in diverse environments
ocw01200
Carbon metabolism
ocw01210
2-Oxocarboxylic acid metabolism
Module
ocw_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ocw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OW730_17565 (nifJ)
00020 Citrate cycle (TCA cycle)
OW730_17565 (nifJ)
00620 Pyruvate metabolism
OW730_17565 (nifJ)
00650 Butanoate metabolism
OW730_17565 (nifJ)
Enzymes [BR:
ocw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
OW730_17565 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
TPP_enzyme_C
Fer4_8
Fer4_9
Fer4_16
Fer4_6
Fer4_21
Fer4
Fer4_2
Fer4_10
Fer4_4
Fer4_17
KorB
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
WBW95489
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Position
complement(3758318..3761836)
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AA seq
1172 aa
AA seq
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MNRIMKTMDGNTAASHVAYAYTDVAAIFPITPSSPMGEKADEWASQGRKNIFGQEVKVVE
MQSEAGAAGAVHGSLQGGALTTTFTASQGLLLMVPNMYKMSGELLPGVFHVSARALAAQA
LSIFGDHQDVMAARQTGFALLASNSVQQAMDLAAVAHIGAIKGKVPFLHFFDGFRTSHEL
QKIEVWDYDQLAELASDCMDDIKAFRKNSLNPEHPVTRGTAQNPDIYFQAREACNPYYDR
LPEIVEETMNKVNAMIGTDYKLFNYYGAEDAEKVIIAMGSVCETVEETVDYLVGKGEKVG
LLSVHLYRPFSIKHFLGQMPKTVKKIAVLDRTKEPGSTGEPLYLDIRDAYYNEENRPVIV
GGRFGLGSKDTTPAQIVAVYDYLNSDSLKTGFTVGINDDLTNTSIPVGETIDIAAQSTKA
CQFWGLGSDGTVGANKSAIKIIGDKTDMYAQGYFSYDSKKSGGITISHLRFGKEKIKSTY
LINKADYVACHNQAYVDKYNVLRSIKDNGIFLLNTLWNAEELEEKLPAKMKKYIAEHGIK
FYTLNAVKIAQEIGLGGRINMIMQSAFFKLADIIPMEDAVKYLKEAVVASYGKKGEKIVK
MNHDAIDRGIESIVEVNVPEAWKNITVEEAQVDEDRWDFMVEIADVMNAQEGDILPVSAF
AEKADGTFPQGTSAYEKRGIGVNVPEWLSENCIQCNQCSYVCPHAVIRPFLLNDEEVKNA
PEGMKVLDTKGKAFEGLKYSMGVSPLDCTGCGNCVDICPAPKKALAMEPLATQEVEQERF
EYLVKLPEKQNPMKKTTLKGSQFEKPLFEFSGACAGCGETPYAKLITQLFGDRMIIANAT
GCSSIWGGSAPATPYTTNDKGHGPAWANSLFEDNAEYGYGMYLAVAQMRDRLLILADEAQ
NSDLSEELKSTLAEWKENFKDGEKGKEIRDRLLPLLEAEKSNPIAEEILEKKEYLVKKSV
WIFGGDGWAYDIGYGGVDHVLASGDDINILVMDTEVYSNTGGQSSKATPTAAIAKFAAGG
KRTKKKDLGMMAMSYGYVYVSQISMGADKNQTIKAITEAENYDGPSLVIAYAPCINHGIK
KGMGKTQDEMKKAVECGYWALYRYNPTVKEEGKNPFTLDSKEPTGDFQEFIKGEVRFAAL
EKVKPEIAQQLFDKVEVDAKERLENYKKLANQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaataatgaaaactatggatggtaatactgctgcatctcacgttgcttatgct
tatactgacgttgcggctatattcccaatcactccatcttctccaatgggagaaaaagct
gatgagtgggcatctcaaggaagaaagaacatctttggccaagaagttaaagttgtagag
atgcaatcagaagctggtgctgctggtgcagtacatggatcattacaaggaggagcttta
actactactttcacagcttctcaaggattattacttatggttcctaacatgtataaaatg
tctggagaattattaccaggtgtattccatgttagtgcaagagcacttgctgctcaagct
ttatcaatctttggtgatcaccaagatgttatggctgcaagacaaacaggatttgcttta
ttagcatctaacagtgtacaacaagctatggacttagctgctgttgctcatatcggtgct
ataaaaggaaaagttccattcttacacttcttcgatggattcagaacatcacacgaatta
caaaaaattgaagtatgggattatgatcaattagctgaattagcttcagattgtatggat
gacattaaagcattcagaaagaattctttaaatcctgagcaccctgttactagaggtact
gcacagaatcctgatatctacttccaagctagagaagcttgtaacccttactatgataga
ttacctgaaatagtagaagaaactatgaataaagttaatgctatgattggtactgactac
aaattattcaactactatggagcagaagatgctgagaaagtaatcattgcaatgggatca
gtttgtgaaactgttgaagaaactgtagattacttagtaggaaaaggtgaaaaggttggt
ttattatcagttcacttatacagacctttctctattaagcacttcttaggacaaatgcct
aaaacagttaagaaaattgctgtattagacagaactaaagagccaggttcaacaggagag
cctctatacttagatattagagatgcttactataacgaagaaaacagaccagttatcgtt
ggtggtagattcggtcttggatctaaagatacaactccagcacaaatcgttgctgtatat
gattacttgaattctgattctcttaagactggattcactgtaggtattaacgatgattta
actaatacttcaattccagttggtgaaacaattgatatagctgctcaaagcactaaagct
tgtcaattctggggacttggatcagatggtactgttggagctaacaagagtgcaatcaaa
attatcggtgataaaactgatatgtacgctcaaggttatttctcatatgactctaagaag
tctggtggtattacaatatcacacttaagatttggtaaagagaaaatcaaatctacatac
ttaattaataaagctgactacgttgcttgtcacaaccaagcgtatgttgataaatataat
gttttaagaagcattaaagataatggtatattcttacttaacactctttggaatgcagaa
gagttagaagaaaagttaccagctaaaatgaaaaaatacattgcagagcatggaatcaag
ttctacactctaaacgctgttaaaatagctcaagagattggtcttggtggaagaattaac
atgataatgcaatcagcattctttaagttagcagatattattcctatggaagacgctgtt
aagtatcttaaagaggcagttgtagcttcttacggtaaaaaaggtgagaagattgttaag
atgaaccatgatgctattgacagaggaattgagtcaatcgttgaggttaatgttccagaa
gcttggaaaaacataactgttgaagaagcacaagttgatgaagatagatgggatttcatg
gttgaaatcgctgacgttatgaatgctcaagaaggagatattcttcctgttagtgcattt
gctgagaaagctgatggtactttcccacaaggaacatctgcttatgagaagagaggtatc
ggtgtaaacgtaccagaatggttatcagaaaactgtattcaatgtaaccaatgttcatac
gtatgtccgcacgctgtaatccgtccattcttattaaatgatgaagaagttaagaatgct
ccagaaggaatgaaagttcttgacactaaaggtaaagcatttgaaggattaaagtactct
atgggtgtatcacctctagactgtactggatgtggaaactgtgttgatatttgtccagct
cctaagaaggctctagctatggaaccacttgcaactcaagaagtagaacaagaaagattt
gagtacttagttaaactacctgagaagcaaaatcctatgaagaaaactactcttaaagga
agccaatttgagaagccattatttgagttctctggtgcttgtgctggatgtggagaaact
ccatatgctaaacttataactcaattattcggagatagaatgatcatagctaatgctact
ggatgttcttcaatctggggtggaagtgctcctgcaactccatacactactaacgataaa
ggacatggaccagcttgggctaactctttattcgaagataatgcagagtatggatacggt
atgtacttagctgttgctcaaatgagagatagattattaatattagctgatgaagctcaa
aacagtgatttaagcgaagagttaaaatctacattagctgagtggaaagaaaactttaaa
gatggtgaaaaaggtaaagaaatcagagatagattattaccattattagaagcagaaaaa
tctaacccaatcgcagaagaaatcttagagaagaaagaatacttagttaagaaatctgtt
tggatatttggtggagacggatgggcttatgacatcggttacggtggagttgaccacgtt
cttgcttcaggtgatgatattaacattcttgtaatggatactgaggtttactctaacact
ggaggtcaatcttcaaaagctactccaactgctgctatagctaaatttgctgctggtggt
aagagaactaagaagaaagatcttggtatgatggcgatgagctatggttatgtatatgta
tctcaaatttctatgggtgcagataagaaccaaacaatcaaagctatcacagaggctgaa
aactatgatggaccatcattagttattgcttacgctccatgtatcaaccatggaatcaaa
aaaggtatgggtaaaactcaagacgagatgaaaaaagcagtagagtgcggatactgggca
ctttacagatacaacccaactgttaaagaagaaggaaagaatccatttacattagattct
aaagagccaactggtgatttccaagagtttattaaaggtgaagtaagattcgcagctctt
gaaaaagttaagccagaaatcgctcaacaattatttgataaagttgaagttgatgctaaa
gaaagacttgaaaactacaagaagttagctaatcaataa
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