Oryx dammah (scimitar-horned oryx): 120851485
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Entry
120851485 CDS
T07255
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120851485 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120851485 (POLR1A)
Enzymes [BR:
oda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120851485 (POLR1A)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120851485 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
120851485
NCBI-ProteinID:
XP_040080199
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTHCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLLGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVIRKEHNSKLTITYPAMVHRRADQKDT
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGRESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSLVAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVYRG
LTDKVGRVKLLPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRLVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRLGIIKESTHCGPRAVRAALNLTEAASFD
EVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFKPYEFTPRAGGFVTGRFLTGIR
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NALLRKGAFLNYSQKIQAAVKALNLEGTNQNGRTPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFYMGEKQNKFRIYKLRFQ
FLPHAYYQQEKCMRPEDILHFMETRFFKILMEAIRKKNSKASAFRSVNTRRATQRDLDSA
GESERSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEEKEDEE
KEDEDVQEERTGLKEDVQQEQEEGGWAPEESSLPGTPLMQPQKRARSREPQGAEAVERRA
QAVRECHPFIEDYQYDTQGGLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGITRC
LLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIE
KEIKDVFAVYGIAVDPRHLSLVADYMCFEGIYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggttcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagtgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggacccgccgactcc
aaagaggtgtgctccacctgcgtgcaggacttcacccactgctctgggcacttgggccac
atcgagctcccactcaccgtgtacaaccctctcctcttcgataaactctacctgttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctctgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagaacaatatacaatcaaaatcctgcagaacaacctcctgggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtgatccgaaaggagcacaat
agcaaactgaccatcacatacccggccatggtgcacaggagagctgaccagaaggacact
gaaccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gctcaagaacacctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaggatgttggcagggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaatgggcagacggtgaacttgcaggctgtcatgaaggatgtggttctgatccgaaaa
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactctttggtggctatggaccgatcctttttgagtcagcttccaggc
caatccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgcg
gcccgctcggtcatctgcccggacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacttaccctcaaccagtcaccccctggaacgttcaggaacta
aggcaggctgtcatcaacggccccaacgtgcaccccggagcctctatggtcatcaacgag
gatggcagtcgcacagccctgagcgcctcagacctcacgcagcgggaggccgtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcacatcgcgcccgcgtcctccctgaagagaaagtcctgcggctccactacgcc
aactgcaaggcctacaacgccgacttcgatggagatgagatgaacgcccacttcccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggggcaaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgtgtgaagctccttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggttgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcaaagatcggcggaaaggcctgggtgaaggagtct
cctcggctcgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggagctgctgtgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccgaaagcggatgtcaggagacttggaatcattaaagagtccacc
cactgtgggccacgggccgtcagggctgcgttaaacctgacagaggcagcatcatttgat
gaggtccaagggaagtggcaggatgcccatctgagtaaagaccagagggattttaacatg
attgacctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcctgc
atgcccttcggtctgcacagacagttcccagagaacaatctgcagatgatggtgcagtct
ggagccaaaggttcgacagtgaacaccatgcagatttcgtgcctgctgggccagatcgag
ttggaaggtcggagacccccgctcatggcatccggcaagtcgttgccctgcttcaagcct
tatgagttcactcccagggctggtggcttcgtcactggcaggttcctcactggcatcagg
cctccggagttcttcttccactgcatggccgggcgagagggtctggtggacactgctgtg
aagaccagccgttccggctacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccagtatgacctgacagtccgcgacagtgatggcagcgtggtgcagttcctgtacggg
gaggatggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctt
accagcaactatgaggtaataatgaaatcgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcacttcagagccatcaaaaaatggcacagcaagcattcc
aacgccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcggctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcacccccgagacttaccagatg
ctgaggatgtgggctgagttagatgaacaaagccggaggaagtaccagaagaaggcagct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatccgtgtca
gaaacatttgaaaagaagatggacgactacagctgcgagtgggcagctcaggcagagagg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctcactgtgcgacccgggtgaggctgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctgaacaccttccactttgccggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagatcctcatggtggccagtgccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcgctgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttctatatgggggagaaacagaacaagttccggatatacaagctgcggttccag
ttcctgccgcacgcgtactaccagcaggagaagtgcatgaggcccgaggacatcttacac
ttcatggaaaccaggttctttaaaattctgatggaagccatcaggaagaagaacagtaaa
gcatcagctttcagaagtgtgaacacgcggagagccacccagcgggatctagacagtgct
ggcgaatcggagaggagtcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggcgatgctgatgcctcggatgccaaacgcaaggaaaaa
caagaggaggaggttgactacgacagcgaggaggaggaggaggagaaggaagacgaggag
aaggaggacgaggacgttcaagaggaaaggaccggcctcaaagaagacgttcagcaggag
caggaggaaggcggctgggcccccgaggagagctcgctccccggcacccccctgatgcag
ccacagaagcgcgcccgaagccgggagccccagggggccgaggcagtggagcgccgggca
caggcggtgcgcgagtgccacccgttcatagaggactaccagtacgacacacagggcggc
ctgtggtgccaggtgacgctgaagctccctctcatgaaggtcaactttgacatgagctcc
ctggtagcgtccttggcccaaggagctgtcatctatgcaaccaagggtatcacaaggtgc
ctcctgaatgagaccaccaacagtaagaacgagaaggagcttgtcttaaacacagaaggc
atcaacctcccggagctgttcaagtacgccgaggtcctagatctgcgccgtctctattcc
aacgacatccatgccatggccagcacgtacggcatcgaggccgcactgcgtgtgattgaa
aaggagatcaaggacgtgtttgccgtatatggcatcgccgttgacccccgccacctctcg
ctggtggctgactacatgtgcttcgagggtatttacaagccactgaaccgctttgggatc
cggtcaaactcctcgccactgcagcagatgacgtttgagaccagcttccagtttctgaag
caggccaccctcctgggatcccatgacgaactgaggtccccatcagcctgcctcgtggtc
gggaaggtcgtcaagggcgggaccggtctcttcgagctcaagcagccactaagatag
DBGET
integrated database retrieval system
