KEGG   Oryx dammah (scimitar-horned oryx): 120872586
Entry
120872586         CDS       T07255                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda03020  RNA polymerase
oda03420  Nucleotide excision repair
oda05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:oda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120872586 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120872586 (POLR2I)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    120872586 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oda03021]
    120872586 (POLR2I)
   03400 DNA repair and recombination proteins [BR:oda03400]
    120872586 (POLR2I)
Transcription machinery [BR:oda03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120872586 (POLR2I)
DNA repair and recombination proteins [BR:oda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120872586 (POLR2I)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR
Other DBs
NCBI-GeneID: 120872586
NCBI-ProteinID: XP_040109022
LinkDB
Position
Unknown
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaacccgacgggacctacgagccaggcttcgtgggtattcgattctgccaggaatgt
aacaacatgctttaccccaaggaggacaaggagaaccgcattctgctctacgcgtgccgg
aactgtgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgagctgacccagatcatcgctgacgtttcccaggaccccacgttgccgcga
accgaagaccacccgtgccaaaagtgcggccacaaggaggcagtgttcttccagtcacac
agtgctcgggccgaggatgccatgcgcttgtactacgtgtgcacggccccgcattgcggc
catcgttggaccgagtga

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