Ostrea edulis (European flat oyster): 125646956
Help
Entry
125646956 CDS
T09123
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00510
N-Glycan biosynthesis
oed00513
Various types of N-glycan biosynthesis
oed00514
Other types of O-glycan biosynthesis
oed00515
Mannose type O-glycan biosynthesis
oed00533
Glycosaminoglycan biosynthesis - keratan sulfate
oed00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oed01100
Metabolic pathways
Module
oed_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
125646956
00513 Various types of N-glycan biosynthesis
125646956
00515 Mannose type O-glycan biosynthesis
125646956
00514 Other types of O-glycan biosynthesis
125646956
00533 Glycosaminoglycan biosynthesis - keratan sulfate
125646956
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
125646956
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oed01003
]
125646956
Enzymes [BR:
oed01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
125646956
2.4.1.90 N-acetyllactosamine synthase
125646956
Glycosyltransferases [BR:
oed01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
125646956
Glycolipid
125646956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
125646956
NCBI-ProteinID:
XP_055996010
LinkDB
All DBs
Position
6:54247625..54313670
Genome browser
AA seq
305 aa
AA seq
DB search
MSAIFRTRRYRHFRKLRRLDFAYCLSISCIILYVIFTYVEHNVESICWLFTPQLEGRIEP
NLSFTSYEEMSSKFKWLHIGGHYSPYCIPAQNVAILIPFRNREAHLRVLLNNLHPILYRQ
QLMYTVYVIEQVDEKPFNKGKLYNIGYQETLKRNHTCFIFHDVDLIPENDKILYGCSRSP
MHLSREIDKFGYRLCDYNLIGGVSAWRKREFEMVNGWSNAFFNWGGEDDDLSYRIMANGL
SIHRYRESLARYTMLKHKRTTINTARFHLLEDSHKRFPIDGLSSLVYIPPTVELHQLFTK
ISVRV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaatcttcagaacacgacgttacagacatttccggaaactacgccgtcttgac
tttgcttactgtttgtctatttcctgtatcattttgtatgtgatatttacatacgtggaa
cacaatgtggaatcaatatgttggttgtttacaccacagcttgaggggagaatagagccc
aacctttccttcacttcttatgaagagatgtcatctaaattcaaatggctgcacatagga
ggacattactcgccttattgtatacccgctcaaaatgtggccatactaattccgttccga
aacagggaggcacacttgcgagttttgttgaataatcttcatccgattctttatcgccaa
caattaatgtacacagtgtatgtcattgagcaggtcgatgagaaaccctttaacaaagga
aaactgtacaacatcgggtatcaagagacacttaaaagaaaccatacctgtttcattttt
catgatgttgatcttattccggagaatgacaaaattttgtatggatgttcaagaagtccc
atgcatttatcacgggaaattgacaagtttggttatagattgtgtgactataacttaatt
ggaggtgtctcagcttggaggaaaagagagtttgaaatggtcaatggatggtcaaatgca
tttttcaattggggaggagaggatgacgacctgagctatagaattatggctaatggattg
tcgatacaccgttacagagaatcactagctagatacacaatgctgaagcataaacgcact
accatcaatactgctagattccatcttctagaagacagtcataaacgatttccaatagat
ggcctatccagtctggtgtatattcctcctacagtagaacttcatcagctattcacaaaa
atatctgtcagagtttga
DBGET
integrated database retrieval system