Ostrea edulis (European flat oyster): 125653997
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Entry
125653997 CDS
T09123
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125653997
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Fib_alpha
Zw10_N
Lipl32
Motif
Other DBs
NCBI-GeneID:
125653997
NCBI-ProteinID:
XP_048739672
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All DBs
Position
7:complement(54728113..54781627)
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AA seq
1761 aa
AA seq
DB search
MDSSSFYKVFLFIFVLKGSHSQRQPRCEQGSCYPATGDLLIGREANLTASSTCGLKRPEN
YCIVSHLEEDTKCFTCDSRESWSEYRRNSHRISNIVSSFRERKLRWWQAENGKQQVYLQL
DLEAEFHFTHLIMTFKTFRPKALLIERSYDFGKTWKVYRYFAQRCDESWPGVKRWPPRDL
SEVICDDRYSDEVPSTEGEVIFRVLPPFIRIQNPYDAKVQDLLKLTNLRVNFTELHGLGD
TLLDSRQEIKDKYYYSMFDMTVRGSCSCYGHASRCEPVDGYNVRPDMVHGQCVCTHNTKG
RNCEQCQDFYNDLPWRPARRNFPNACKKCNCNGHSDKCKFDPAVYEANGEISGGVCLDCQ
HNTLGRNCQQCRDMFFQDPYQDIRSSTICKPCDCDPSGSLFGGRCDDHSDESNGLLAGRC
HCRQHVEGKRCDTCKDGFYSLNEANPQGCLACDCSMIGTVTNSSCDKDTGMCLCKRYVTG
DRCDTCHHGFYGLSDIDTGCTPCDCDVGGSISEACDQVTGACTCKPNIIGQQCDQPRPGY
YYAMLDFFRYEAELAKGIGQVRQYIQEPYPDGYQPWTGPGYMLVREGDSLEFNVSNIEFP
TNYDIVIRYDLRMPEIWESVLVTIRRDKIPDENGPCANHVARDDEKSATLNPGFRYVEVS
PSACLEPNTNYTIRLDFRQYKSGRSTPDATTLIDSIILVPATDSIPIFQVFGYLNYMKNQ
FIRYQCREKQLTPYRPNYSDFCKKLTFSISTSMLHRALPCECDPTGSLNSECEPAGGQCV
CKPNVVGRKCDRCAPGTYNFGPAGCSACNCHEYGSRDNLCDAQTGQCLCIYNVGSRDCSQ
CEPGYWGFPQCRPCDCNGNADICDDLTGNCIECRNNTAGDHCERCDAEYYGDPRSYIRKT
CRPCMCPGGPDSQTQHADSCSEDPRQQTIVCNCLPGYQGPNCDTCSENYFGNPLVVNSTC
EPCVCNNNIDPNVAGSCDTSSGECLKCLFNTEGFNCEKCKPGYFGDATTQSCVECVCDPY
GTDKSTESCDRETGQCPCLPNVTGLRCDTCLVGYWNITSGEGCSSCGCDPEGSFGITCNQ
FDGQCACQQGRGGLECDQCEDLFWGDPKVQCTACDCNAQGSSDMQCDRRTGQCVCLTGIS
GYKCDRCDRGTTGELPNCKPCGECFDNWDRVIRDLRGQTQYLVDEALKIKATGVEKAFEK
EFAEMENNIKEIRDIIRNTNISSNDIKDIEMNLMQLRESLNISYSDLERTEVEINTRTDS
IRQSNNDIRALQMGVDKLKLKIENLKKNATNVQAQDVEGAYNLTKKAQDMSIAAQRKVNA
TDGVLDQSEKIRDEVENMIKTQHSEFERKVQENENNLNEINGQVSGLGDKIADINEMVCD
KRGEPCHPVCGGGGCGVCGEEQSCDNGAVKKAGNALDLARKAEDLLTIKERNATDLLQKL
QNSQRGAEMGKDEAQMAYNEALKVKTETENARTALQDLFVRISGFLSADGATPDDIKQIA
EEVLAMSISLTPQQILDLAQQINITIQGLQDIDKILADTSSDLARAKGLKERAETAEADA
KSILEKAEDVQANLKGATDAQQAAQAAITQADKDIGDAEQDLTQIESETTAATDKSNQSL
TSLEALKARLKDLKGKYIENEQKVANAERAAQEAERLAHKTEEAANKLQTQYSKTAQDLN
SKYNLTTQAQSRAESLKRRADKLATDTTAKLKKLAEMQENFNANEKRLNKLSTDIDELNR
RMAEYLQAINNKATEYYNCKT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagttcattttacaaagttttcctatttatatttgtattgaaaggatctcac
tcacagaggcagccacgatgtgaacaaggcagctgttatcctgccacaggtgatttactt
ataggacgcgaggccaaccttactgcctcgtccacctgtggtctgaagcgaccagaaaac
tactgcatcgtcagtcacttagaagaagacactaagtgttttacttgtgactcccgtgag
tcgtggtcagagtaccgacggaacagtcacagaattagtaacattgtgtcgtcgttccgc
gaaagaaaactgcgatggtggcaggcagaaaatggcaagcaacaagtgtaccttcagttg
gatttagaggctgagtttcatttcactcatcttatcatgacttttaagactttcagacca
aaggctctgctaattgagaggtcctatgacttcggaaaaacgtggaaggtttaccgatat
tttgcccagcgctgtgatgaatcatggccaggtgtaaagaggtggccgcccagggacttg
agtgaggtgatctgtgatgatcgttattctgatgaagtaccatcgacagagggagaggtg
atattcagagtccttccaccatttatcaggatacagaatccttatgatgctaaggtacaa
gatttactgaagctgaccaatctccgggtgaatttcactgagctccatggattaggcgac
actctattggacagccggcaggagattaaggacaaatactactactccatgtttgacatg
acggttagagggagctgtagttgttatggccatgcatccagatgtgaaccagtggatggg
tacaatgtcagaccagacatggtacatggtcaatgtgtctgtacacacaacaccaaggga
cgtaactgtgaacagtgtcaggacttctataatgacctaccctggagaccagcgagaaga
aacttccccaatgcttgtaaaaagtgcaattgtaatggtcactcggacaagtgtaaattt
gacccagcagtgtacgaggcgaatggtgaaatcagtggaggtgtttgtttggactgtcaa
cacaacaccctgggcaggaactgtcagcagtgcagggacatgttcttccaggacccctac
caggacattcggagctcaactatctgtaaaccatgtgactgtgatccatctgggtccctc
tttgggggacggtgtgatgaccactccgatgagtccaatggacttctagcaggaaggtgt
cattgtaggcagcacgtggagggcaagcgttgtgacacctgtaaagatggcttctacagt
ctgaacgaggctaatcctcagggctgtctcgcttgtgattgcagcatgattggtactgta
acgaactcgtcctgtgacaaggacacaggaatgtgtctgtgtaaacgctacgttacggga
gacaggtgtgatacatgccatcatggattttatggtttgagtgacattgacactgggtgt
acgccttgtgattgtgatgtgggtgggtccatcagtgaagcatgtgaccaggtgactgga
gcctgtacctgtaaacccaacatcattggtcagcagtgtgaccagccccgcccaggctat
tactacgccatgttggattttttccggtatgaagctgaattggccaaaggaattggacag
gtgcgccagtacatccaggagccataccctgatggctatcagccgtggactggtccaggg
tacatgcttgtgagggaaggagatagcctggaatttaatgtcagtaatatagaattccca
accaactatgacattgtcatccgctatgatctaaggatgccagaaatctgggaaagtgtg
ttagtaactattcgccgtgacaaaattccagatgagaatggaccttgtgcaaatcacgta
gctagggatgacgagaagtctgccacacttaacccaggatttcgatatgtggaggtgtcc
ccctcagcctgtctggaaccaaacactaattacacgatacgtttggacttccgccagtac
aagtctggaagatctaccccagatgctaccactcttattgactctataatactggtgcct
gccactgacagtattccaatattccaagtatttgggtatttgaattacatgaagaaccag
tttattcgttaccagtgtcgtgagaagcagctaacaccataccgaccaaactactccgac
ttctgtaaaaagttgaccttcagcatcagtacaagcatgcttcaccgagcactgccatgt
gaatgcgaccccactggttccttgaattctgagtgtgaacctgctggtggacagtgtgtg
tgtaaacctaatgttgttggtaggaagtgtgaccgctgtgctccaggaacttacaacttt
ggtcctgctggctgttctgcctgtaattgccatgagtatggatcccgtgacaatctttgt
gatgcccagactggacagtgtctgtgtatatacaacgttggatctcgagactgcagccag
tgtgagccgggatactggggattcccccaatgtaggccatgtgactgtaatggaaatgca
gacatttgtgatgatttaacaggaaattgtattgagtgtcgcaacaacacagctggagat
cattgtgaaagatgtgatgctgaatattacggtgatccaagaagttacatcaggaagact
tgccgtccatgcatgtgtccaggaggccccgacagtcagactcagcatgccgattcttgt
agtgaggaccctagacagcagaccattgtctgcaactgtttacctggataccaaggccct
aactgtgatacctgcagcgagaactactttggtaaccctctggtggtaaacagtacctgt
gaaccctgtgtatgtaacaacaacatagatcccaatgtggcgggcagctgtgacacctcc
tcaggagaatgtctgaagtgtctgtttaacacagagggatttaactgtgaaaaatgtaaa
cctggttacttcggagatgccaccactcagagttgtgtggagtgtgtttgtgacccctac
ggtacagacaaatccactgaatcatgtgacagagagaccggacagtgtccctgcctaccc
aatgtcacaggactaaggtgtgacacctgtctggtggggtactggaacattaccagtggg
gaggggtgctcatcctgtgggtgtgatcctgagggctcatttggaatcacctgtaatcaa
tttgatggtcagtgtgcctgtcagcaggggaggggtggactggaatgcgatcagtgtgag
gatttgttctggggtgaccccaaagtccagtgtacagcctgtgactgtaatgcccagggt
tcctctgacatgcagtgtgaccgacgaaccggtcagtgtgtttgtctgaccgggattagt
ggctataagtgtgacagatgtgaccgaggaaccactggggaactccccaactgtaaaccc
tgtggggaatgctttgataattgggaccgagttatcagggacctcagaggccagacccag
tatttagtggatgaagctctgaagatcaaagccacaggggtggagaaggcctttgagaaa
gagtttgcagaaatggagaataacattaaagaaattcgagacatcatccgcaatactaac
atctcgtccaatgatatcaaagatattgaaatgaatctcatgcaactcagggagtcattg
aacattagctacagtgatctagagaggactgaggtagagatcaacacaagaacagacagc
attagacagagtaataatgatatcagggccctgcagatgggtgttgacaaactgaaactg
aaaatagaaaatctcaagaagaatgccaccaatgtacaagctcaggatgtagaaggtgct
tacaaccttacgaaaaaggctcaagacatgtctattgctgctcagaggaaggtgaatgcc
actgatggagttctggaccagtctgaaaaaatacgagatgaagtggagaatatgatcaag
actcagcattccgagtttgaaagaaaagtccaggaaaatgaaaacaatcttaatgaaatc
aacggccaggtctctggtcttggagataaaattgctgatatcaatgaaatggtgtgtgac
aagcgtggagagccctgccacccagtgtgtggaggaggtggatgtggagtgtgtggtgaa
gaacagagctgtgataatggagcagtgaagaaagcgggaaatgccctggaccttgcccgc
aaagccgaggatttgctcaccattaaagagagaaatgccacggatctcttacagaagctg
caaaattctcagagaggagcagaaatgggtaaggatgaagcccagatggcctacaacgag
gctttaaaagtgaaaactgaaacagagaatgcccgtactgccctgcaggatctgtttgtc
aggatctcaggatttctgtctgcagatggtgccactcctgatgacatcaaacagatagcc
gaggaggtgttagctatgagcatttccctgacccctcagcagattctagatttggcccag
cagataaatatcaccatacaaggattgcaggatattgataaaatcctggcagacaccagt
agtgatctggcccgggccaaaggactcaaggaaagagcagaaacagcagaggctgatgcc
aagtccattctggagaaggcggaggacgtgcaggccaatctaaagggagccacagatgcc
cagcaggctgcccaggccgccattacccaggcagataaagatattggagatgcagaacag
gatctcacacagattgagtctgagacgacagcagccacagacaagtcgaaccagtcgctg
acgtcactggaagccctgaaagccagactgaaagatctgaagggcaaatacattgagaac
gagcagaaggttgccaatgctgagagagctgcccaggaagctgagagattggcccacaaa
acagaggaggctgctaacaagttacagacacagtattccaagactgctcaggatctgaac
tcgaaatacaatctcacaactcaggctcagtctcgagctgaatctctaaagaggagggcg
gataaactggccactgacaccactgcaaaactaaaaaaattagctgaaatgcaagagaac
tttaatgccaatgaaaagagactgaacaagctgtctacagacattgatgaactaaatcga
cgaatggctgagtatttacaagccatcaacaacaaagccacagaatactacaattgtaaa
acctaa
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integrated database retrieval system
